RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 RPL13AP3Q6NVV1 102 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 SLC36A1Q7Z2H8 476 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 PNKDQ8N490 385 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 OR4Q3Q8NH05 313 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 FAM110DQ8TAY7 271 aaPredicted RBP13.42□□□□□ -0.26
LIG1-205ENST00000593425 SGK3Q96BR1 496 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 REEP6Q96HR9 211 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 DCTN5Q9BTE1 182 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 IL20Q9NYY1 176 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 CD300AQ9UGN4 299 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 LYVE1Q9Y5Y7 322 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 TET2Q6N021 2002 aaPredicted RBP13.41□□□□□ -0.26
LIG1-205ENST00000593425 ZNF816-ZNF321PA0A0X1KG74 233 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 DHRS12A0PJE2 317 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 CDIPTO14735 213 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 TSPAN9O75954 239 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 TFF1P04155 84 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 SPI1P17947 270 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 PRDX6P30041 224 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 TEX30Q5JUR7 227 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 STUMQ69YW2 141 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 PRSS45Q7RTY3 260 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 OR5T2Q8NGG2 359 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 NMNAT2Q9BZQ4 307 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 TBC1D23Q9NUY8 699 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 ZNF319Q9P2F9 582 aa13.41□□□□□ -0.26
LIG1-205ENST00000593425 CAB39Q9Y376 341 aaPredicted RBP13.41□□□□□ -0.26
LIG1-205ENST00000593425 NOTCH1P46531 2555 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 BTBD17A6NE02 478 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 NPFFO15130 113 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 NDUFB3O43676 98 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 TIPRLO75663 272 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 GASTP01350 101 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 TGM4P49221 684 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 GMFBP60983 142 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 GRB2P62993 217 aaKnown RBP13.4□□□□□ -0.26
LIG1-205ENST00000593425 GUCA2AQ02747 115 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 EGR3Q06889 387 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 EIF2B1Q14232 305 aaKnown RBP13.4□□□□□ -0.26
LIG1-205ENST00000593425 LINC01590Q5TEZ4 76 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 ZNF770Q6IQ21 691 aaPredicted RBP13.4□□□□□ -0.26
LIG1-205ENST00000593425 RASSF6Q6ZTQ3 369 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 FAM57BQ71RH2 274 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 CMTM4Q8IZR5 234 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 OR6K6Q8NGW6 343 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 NPRL2Q8WTW4 380 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 TNFRSF14Q92956 283 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 C12orf43Q96C57 262 aaKnown RBP13.4□□□□□ -0.26
LIG1-205ENST00000593425 ELAC2Q9BQ52 826 aaKnown RBP13.4□□□□□ -0.26
LIG1-205ENST00000593425 TSSK6Q9BXA6 273 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 TLNRD1Q9H1K6 362 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 WDR13Q9H1Z4 485 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 SNTG1Q9NSN8 517 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 DNAJC27Q9NZQ0 273 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 RHBDD3Q9Y3P4 386 aa13.4□□□□□ -0.26
LIG1-205ENST00000593425 TNFRSF11BO00300 401 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 SOX14O95416 240 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 EEF1B2P24534 225 aaKnown RBP13.39□□□□□ -0.27
LIG1-205ENST00000593425 HSD11B1P28845 292 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 SAA4P35542 130 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 NAA10P41227 235 aaPredicted RBP13.39□□□□□ -0.27
LIG1-205ENST00000593425 SLC15A1P46059 708 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 HMGA2P52926 109 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 SLC25A1P53007 311 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 ZNF121P58317 390 aaPredicted RBP13.39□□□□□ -0.27
LIG1-205ENST00000593425 PPP1R8Q12972 351 aaKnown RBP13.39□□□□□ -0.27
LIG1-205ENST00000593425 C2orf68Q2NKX9 166 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 GFOD2Q3B7J2 385 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 C8orf46Q8TAG6 207 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 H1FXQ92522 213 aaKnown RBP13.39□□□□□ -0.27
LIG1-205ENST00000593425 ITPKCQ96DU7 683 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 DMRTB1Q96MA1 342 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 AMELYQ99218 206 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 PAPOLGQ9BWT3 736 aaKnown RBP13.39□□□□□ -0.27
LIG1-205ENST00000593425 FGF23Q9GZV9 251 aaPredicted RBP13.39□□□□□ -0.27
LIG1-205ENST00000593425 ARMC1Q9NVT9 282 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 HAO2Q9NYQ3 351 aa13.39□□□□□ -0.27
LIG1-205ENST00000593425 MEIOCA2RUB1 952 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 GPR37O15354 613 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 KRT36O76013 467 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 TGFBR2P37173 567 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 GNALP38405 381 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 GSK3AP49840 483 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 DGUOKQ16854 277 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 LRRC10Q5BKY1 277 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 SAMD4BQ5PRF9 694 aaKnown RBP13.38□□□□□ -0.27
LIG1-205ENST00000593425 ATPAF1Q5TC12 328 aaPredicted RBP13.38□□□□□ -0.27
LIG1-205ENST00000593425 HIST2H2BDQ6DRA6 164 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 SLC35E4Q6ICL7 350 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 PGAM4Q8N0Y7 254 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 AQP11Q8NBQ7 271 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 OR6N2Q8NGY6 317 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 RNF133Q8WVZ7 376 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 RPL3LQ92901 407 aaKnown RBP13.38□□□□□ -0.27
LIG1-205ENST00000593425 GAFA1Q96PS6 74 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 CDRT15Q96T59 188 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 ABHD6Q9BV23 337 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 PPA2Q9H2U2 334 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 TOR3AQ9H497 397 aa13.38□□□□□ -0.27
LIG1-205ENST00000593425 BRD7Q9NPI1 651 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms