RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	UMAD1	C9J7I0	102 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	HSD11B1	P28845	292 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	RPL12	P30050	165 aa	Known RBP	12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	CDX1	P47902	265 aa	Predicted RBP	12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	P2RY4	P51582	365 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	ZP2	Q05996	745 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	CDPF1	Q6NVV7	123 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	ZNF565	Q8N9K5	539 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	ZNF519	Q8TB69	540 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	DNAJA3	Q96EY1	480 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	MMAB	Q96EY8	250 aa	Predicted RBP	12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	YPEL4	Q96NS1	127 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	LRRC61	Q9BV99	259 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	CHST5	Q9GZS9	411 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	CHRD	Q9H2X0	955 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	SEC16A	O15027	2179 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	BGLAP	P02818	100 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	RPS2	P15880	293 aa	Known RBP	12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	CLDN6	P56747	220 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	ACKR1	Q16570	336 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	HEPN1	Q6WQI6	88 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	FOXRED2	Q8IWF2	684 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	DEFB119	Q8N690	84 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	NICN1	Q9BSH3	213 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	CNTNAP3	Q9BZ76	1288 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	CUTC	Q9NTM9	273 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	VSX1	Q9NZR4	365 aa	Predicted RBP	12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	LOC101059948	A0A1B0GTJ6	334 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	FCGR2C	P31995	323 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	RPL27	P61353	136 aa	Known RBP	12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	RAB1A	P62820	205 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	C1QL3	Q5VWW1	255 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546		Q7L0L9	218 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	SLC22A24	Q8N4F4	322 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	ZNF321P	Q8N8H1	164 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	ZNF615	Q8N8J6	731 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	ZNF383	Q8NA42	475 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	AKR7L	Q8NHP1	331 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	FGGY	Q96C11	551 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	C14orf144	Q96I85	54 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	C8orf33	Q9H7E9	229 aa	Predicted RBP	12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	FAM212B	Q9NTI7	297 aa	Predicted RBP	12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	HDGFL3	Q9Y3E1	203 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	ARID1A	O14497	2285 aa		12.8	□□□□□ -0.36
RFX2-222	ENST00000592546	TMEM14DP	A8MWL7	114 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546		K7EPK0	472 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	P2RY10	O00398	339 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	RNF224	P0DH78	156 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	IGLV3-21	P80748	117 aa	Predicted RBP	12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	KIAA0141	Q14154	515 aa	Predicted RBP	12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	ACTBL2	Q562R1	376 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	OPN5	Q6U736	354 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	FAM71E2	Q8N5Q1	922 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	PNLDC1	Q8NA58	520 aa	Known RBP	12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	UBAC2	Q8NBM4	344 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	SLAMF9	Q96A28	289 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	ZDHHC12	Q96GR4	267 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	MARS2	Q96GW9	593 aa	Known RBP	12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	SCGB3A2	Q96PL1	93 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	EIF5A2	Q9GZV4	153 aa	Known RBP	12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	PTGES2	Q9H7Z7	377 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	FBLN5	Q9UBX5	448 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	MEMO1	Q9Y316	297 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	CLDN4	O14493	209 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	NME2P1	O60361	137 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	MPZL1	O95297	269 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	CLPS	P04118	112 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	SFTPB	P07988	381 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	TMEM33	P57088	247 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	RPS23	P62266	143 aa	Known RBP	12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	FUT7	Q11130	342 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	BIK	Q13323	160 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	TOMM34	Q15785	309 aa	Predicted RBP	12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	HIST2H3A	Q71DI3	136 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	MED25	Q71SY5	747 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	LHFPL1	Q86WI0	220 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	KLHDC7B	Q96G42	594 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	PRO3102	Q9H379	93 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	PRDM13	Q9H4Q3	707 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	UBQLN4	Q9NRR5	601 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	PCDH15	Q96QU1	1955 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546	TRIOBP	Q9H2D6	2365 aa		12.79	□□□□□ -0.36
RFX2-222	ENST00000592546		A0A0A6YYD4	124 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	TMEM269	A0A1B0GVZ9	245 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	HPGD	P15428	266 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	PPM1F	P49593	454 aa	Predicted RBP	12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	EMP2	P54851	167 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	AADACL3	Q5VUY0	350 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	SLC25A43	Q8WUT9	341 aa	Predicted RBP	12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	GNRHR2	Q96P88	292 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	SMIM3	Q9BZL3	60 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	LPAR5	Q9H1C0	372 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	GPR27	Q9NS67	375 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	PARPBP	Q9NWS1	579 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	GAR1	Q9NY12	217 aa	Known RBP	12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	GSTP1	P09211	210 aa	Known RBP	12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	DANCR	P0C864	163 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	S100A2	P29034	98 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	GNAL	P38405	381 aa		12.78	□□□□□ -0.36
RFX2-222	ENST00000592546	CCR5	P51681	352 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms