RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	NKIRAS2	Q9NYR9	191 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	MYEF2	Q9P2K5	600 aa	Known RBP	13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	TINAG	Q9UJW2	476 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	LHFPL6	Q9Y693	200 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	LINC00587	B1AMM8	73 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	DISC1	C4P0D8	188 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	ARPC1B	O15143	372 aa	Known RBP	13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	GATB	O75879	557 aa	Known RBP	13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	RLN2	P04090	185 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	MPG	P29372	298 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	MNDA	P41218	407 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	FOXC1	Q12948	553 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	WDR38	Q5JTN6	314 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	AVPI1	Q5T686	147 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	FOXL2NB	Q6ZUU3	175 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	FCRLA	Q7L513	359 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	KRT77	Q7Z794	578 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	C20orf196	Q8IYI0	205 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	BPIFC	Q8NFQ6	507 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	ABHD3	Q8WU67	409 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	RNF133	Q8WVZ7	376 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	DCBLD2	Q96PD2	775 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	TSNAX	Q99598	290 aa	Known RBP	13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	MRI1	Q9BV20	369 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR10A4	Q9H209	315 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	SEC61A2	Q9H9S3	476 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	WASF3	Q9UPY6	502 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	RCE1	Q9Y256	329 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318		F5H5P2	479 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	WRB	O00258	174 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	PIN1P1	O15428	100 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	KRT33A	O76009	404 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	NR2C1	P13056	603 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	MAGEB1	P43366	347 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	PMP22	Q01453	160 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	SRY	Q05066	204 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	MFGE8	Q08431	387 aa	Predicted RBP	13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	SLC10A1	Q14973	349 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR10H5	Q8NGA6	315 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR6N1	Q8NGY5	312 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR5AK2	Q8NH90	309 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	CA10	Q9NS85	328 aa		13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	SPEN	Q96T58	3664 aa	Known RBP	13.55	□□□□□ -0.24
DDX39A-209	ENST00000589318	TRBV5-5	A0A0J9YX44	114 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318		A0A1W2PPK0	400 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	KLK10	O43240	276 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	ARL6IP5	O75915	188 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	NDUFB6	O95139	128 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	RIDA	P52758	137 aa	Known RBP	13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	RASGEF1B	Q0VAM2	473 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	PLXDC2	Q6UX71	529 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR10AC1	Q8NH08	325 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	PHYHIP	Q92561	330 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	NABP1	Q96AH0	204 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	SMAD5	Q99717	465 aa	Known RBP	13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR51M1	Q9H341	326 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	BEX1	Q9HBH7	125 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	BARX1	Q9HBU1	254 aa	Predicted RBP	13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	IGKV3D-15	A0A087WSY6	115 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	TRAV20	A0A0B4J274	112 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	ACOD1	A6NK06	481 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	TMEM212	A6NML5	194 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	ZNF879	B4DU55	563 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	ACOT7	O00154	380 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	SGCE	O43556	437 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	FOLR2	P14207	255 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	FAU	P35544	74 aa	Known RBP	13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	RAD52	P43351	418 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR10A3	P58181	314 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	GUCA2B	Q16661	112 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	DEGS2	Q6QHC5	323 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	FCAMR	Q8WWV6	532 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	PPP1R14A	Q96A00	147 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	SLAMF6	Q96DU3	332 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	ZNF837	Q96EG3	531 aa	Predicted RBP	13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	DERL3	Q96Q80	235 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	SCNM1	Q9BWG6	230 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	DEFB127	Q9H1M4	99 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	NOX4	Q9NPH5	578 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	GSN-AS1	Q9NRJ2	163 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	ZFP57	Q9NU63	452 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	GDF2	Q9UK05	429 aa	Predicted RBP	13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	SLC22A13	Q9Y226	551 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318	SSUH2	Q9Y2M2	353 aa		13.54	□□□□□ -0.24
DDX39A-209	ENST00000589318		A0A1B0GVC2	190 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318		A6NIN4	97 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	DHH	O43323	396 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	ACTL6A	O96019	429 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	EPX	P11678	715 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	C10orf91	Q5T1B1	145 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	HES5	Q5TA89	166 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	SYT9	Q86SS6	491 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	CATSPERD	Q86XM0	798 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	DNAAF1	Q8NEP3	725 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR51A4	Q8NGJ6	313 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	MFF	Q9GZY8	342 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	C1orf198	Q9H425	327 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	SPRR3	Q9UBC9	169 aa		13.53	□□□□□ -0.24
DDX39A-209	ENST00000589318	FLVCR2	Q9UPI3	526 aa		13.53	□□□□□ -0.24

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