RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 RORCP51449 518 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 KLF3P57682 345 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 PSMA6P60900 246 aaKnown RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 MXD1Q05195 221 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 ZNF718Q3SXZ3 478 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 ZNF404Q494X3 552 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 SPATA46Q5T0L3 261 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 BCL2L15Q5TBC7 163 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 SLC25A40Q8TBP6 338 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 GPR148Q8TDV2 347 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 SLC25A46Q96AG3 418 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 MARS2Q96GW9 593 aaKnown RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 OR14A2Q96R54 314 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 OR2J1Q9GZK6 312 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 DUSP13Q9UII6 198 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 CHD3Q12873 2000 aaKnown RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 ZNF879B4DU55 563 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 M0R135 149 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 UCHL1P09936 223 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 TPTEP56180 551 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 Q499Y3 187 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 MBNL2Q5VZF2 373 aaKnown RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 UNQ9370/PRO34162Q6UXP9 181 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 LINC00299Q6ZSB3 139 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 LRP11Q86VZ4 500 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 MCFD2Q8NI22 146 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 RGP1Q92546 391 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 APOBEC3DQ96AK3 386 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 ZNF799Q96GE5 643 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 KCNJ15Q99712 375 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 MMP27Q9H306 513 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 TPK1Q9H3S4 243 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 DYNLRB1Q9NP97 96 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 G6PC2Q9NQR9 355 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 FAM206AQ9NX38 181 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 MYEF2Q9P2K5 600 aaKnown RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 SLC22A13Q9Y226 551 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 VPS13CQ709C8 3753 aa17.24■□□□□ 0.35
ATG4D-208ENST00000588667 CELSR1Q9NYQ6 3014 aa17.24■□□□□ 0.35
ATG4D-208ENST00000588667 M0R233 179 aa17.24■□□□□ 0.35
ATG4D-208ENST00000588667 APOC1P02654 83 aa17.24■□□□□ 0.35
ATG4D-208ENST00000588667 OCM2P0CE71 109 aa17.24■□□□□ 0.35
ATG4D-208ENST00000588667 GCH1P30793 250 aa17.24■□□□□ 0.35
ATG4D-208ENST00000588667 SHEQ5VZ18 495 aa17.24■□□□□ 0.35
ATG4D-208ENST00000588667 COLCA1Q6ZS62 124 aa17.24■□□□□ 0.35
ATG4D-208ENST00000588667 TPRA1Q86W33 373 aa17.24■□□□□ 0.35
ATG4D-208ENST00000588667 KLF14Q8TD94 323 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-208ENST00000588667 C1QTNF5Q9BXJ0 243 aa17.24■□□□□ 0.35
ATG4D-208ENST00000588667 TRBV5-5A0A0J9YX44 114 aa17.23■□□□□ 0.35
ATG4D-208ENST00000588667 ISG15P05161 165 aa17.23■□□□□ 0.35
ATG4D-208ENST00000588667 UBCP0CG48 685 aaKnown RBP17.23■□□□□ 0.35
ATG4D-208ENST00000588667 CX3CR1P49238 355 aa17.23■□□□□ 0.35
ATG4D-208ENST00000588667 ODF4Q2M2E3 257 aa17.23■□□□□ 0.35
ATG4D-208ENST00000588667 Q5PR19 223 aa17.23■□□□□ 0.35
ATG4D-208ENST00000588667 PRSS57Q6UWY2 283 aa17.23■□□□□ 0.35
ATG4D-208ENST00000588667 OR5L1Q8NGL2 311 aa17.23■□□□□ 0.35
ATG4D-208ENST00000588667 TBC1D15Q8TC07 691 aa17.23■□□□□ 0.35
ATG4D-208ENST00000588667 BARX1Q9HBU1 254 aaPredicted RBP17.23■□□□□ 0.35
ATG4D-208ENST00000588667 GPR160Q9UJ42 338 aa17.23■□□□□ 0.35
ATG4D-208ENST00000588667 STARD10Q9Y365 291 aa17.23■□□□□ 0.35
ATG4D-208ENST00000588667 TRAV1-2A0A0B4J238 106 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 NDUFS7O75251 213 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 IGHV3-13P01766 116 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 IGHV4-39P01824 125 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 MPV17P39210 176 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 PRKXP51817 358 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 HSD17B12Q53GQ0 312 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 FAM27D1Q5T7N8 215 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 TMEM244Q5VVB8 128 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 DRAM2Q6UX65 266 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 SPNS3Q6ZMD2 512 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 KRTAP1-3Q8IUG1 177 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 RDH10Q8IZV5 341 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 ZNF283Q8N7M2 679 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 DERL3Q96Q80 235 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 NXF2Q9GZY0 626 aaKnown RBP17.22■□□□□ 0.35
ATG4D-208ENST00000588667 PBOV1Q9GZY1 135 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 PPIL3Q9H2H8 161 aaKnown RBP17.22■□□□□ 0.35
ATG4D-208ENST00000588667 BRD7Q9NPI1 651 aa17.22■□□□□ 0.35
ATG4D-208ENST00000588667 NUFIP1Q9UHK0 495 aaKnown RBP17.22■□□□□ 0.35
ATG4D-208ENST00000588667 ACOD1A6NK06 481 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 CLEC2LP0C7M8 214 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 ACHEP22303 614 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 SLC6A9P48067 706 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 HNRNPA0Q13151 305 aaKnown RBP17.21■□□□□ 0.35
ATG4D-208ENST00000588667 MOGQ16653 247 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 NKPD1Q17RQ9 610 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 ELMOD2Q8IZ81 293 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 TSEN15Q8WW01 171 aaKnown RBP17.21■□□□□ 0.35
ATG4D-208ENST00000588667 VRK1Q99986 396 aaPredicted RBP17.21■□□□□ 0.35
ATG4D-208ENST00000588667 POFUT1Q9H488 388 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 NOX4Q9NPH5 578 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 TAAR3PQ9P1P4 343 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 HHLA2Q9UM44 414 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 FLNAP21333 2647 aaKnown RBP17.21■□□□□ 0.35
ATG4D-208ENST00000588667 SHISA3A0PJX4 238 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 LCATP04180 440 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 ALDH3B1P43353 468 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 ZNF121P58317 390 aaPredicted RBP17.21■□□□□ 0.35
ATG4D-208ENST00000588667 CROCCP3Q8IVE0 287 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms