RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 M0QXV9 152 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 SS18L1O75177 396 aaPredicted RBP5.32□□□□□ -1.56
VMP1-208ENST00000588617 NIPSNAP2O75323 286 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 SSTR5P35346 364 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 UBE2AP49459 152 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 ZNF136P52737 540 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 RBMY1FQ15415 496 aaKnown RBP5.32□□□□□ -1.56
VMP1-208ENST00000588617 ZBTB6Q15916 424 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 FBXW9Q5XUX1 488 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 BHLHA15Q7RTS1 189 aaPredicted RBP5.32□□□□□ -1.56
VMP1-208ENST00000588617 RERGQ96A58 199 aaPredicted RBP5.32□□□□□ -1.56
VMP1-208ENST00000588617 FAM19A4Q96LR4 140 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 TAAR1Q96RJ0 339 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 TIMM17AQ99595 171 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 ZNF251Q9BRH9 671 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 C7orf50Q9BRJ6 194 aaKnown RBP5.32□□□□□ -1.56
VMP1-208ENST00000588617 SAV1Q9H4B6 383 aaPredicted RBP5.32□□□□□ -1.56
VMP1-208ENST00000588617 TMEM100Q9NV29 134 aa5.32□□□□□ -1.56
VMP1-208ENST00000588617 NDRG2Q9UN36 371 aaKnown RBP5.32□□□□□ -1.56
VMP1-208ENST00000588617 PUS1Q9Y606 427 aaKnown RBP eCLIP5.32□□□□□ -1.56
VMP1-208ENST00000588617 USP42Q9H9J4 1324 aaKnown RBP5.31□□□□□ -1.56
VMP1-208ENST00000588617 F8VZ95 297 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 INS-IGF2F8WCM5 200 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 CA11O75493 328 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 LY6G6DO95868 133 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 BCHEP06276 602 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 OR12D2P58182 307 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 ARG2P78540 354 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 IL5RAQ01344 420 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 ERCC8Q13216 396 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 FLOT2Q14254 428 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 BSXQ3C1V8 233 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 TMEM255AQ5JRV8 349 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 STEAP4Q687X5 459 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 CEMP1Q6PRD7 247 aaPredicted RBP5.31□□□□□ -1.56
VMP1-208ENST00000588617 TMEM25Q86YD3 366 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 PLCZ1Q86YW0 608 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 LRRC52Q8N7C0 313 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 ZNF738Q8NE65 137 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 PIFOQ8TCI5 191 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 ABHD3Q8WU67 409 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 ALS2CR12Q96Q35 445 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 VAX2Q9UIW0 290 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 PSMD13Q9UNM6 376 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 HES2Q9Y543 173 aa5.31□□□□□ -1.56
VMP1-208ENST00000588617 BRCA1P38398 1863 aaKnown RBP5.3□□□□□ -1.56
VMP1-208ENST00000588617 A6NDX4 124 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 CLDN34H7C241 214 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 GLSO94925 669 aaPredicted RBP5.3□□□□□ -1.56
VMP1-208ENST00000588617 OCMP0CE72 109 aaPredicted RBP5.3□□□□□ -1.56
VMP1-208ENST00000588617 RPS9P46781 194 aaKnown RBP5.3□□□□□ -1.56
VMP1-208ENST00000588617 DSCR10P59022 87 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 CYP24A1Q07973 514 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 RTL4Q6ZR62 310 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 Q8N9W7 124 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 OR8G5Q8NG78 346 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 OR5P2Q8WZ92 322 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 TNFRSF14Q92956 283 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 TM4SF18Q96CE8 201 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 SLC38A1Q9H2H9 487 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 PRORYQ9H606 182 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 WDR55Q9H6Y2 383 aaPredicted RBP5.3□□□□□ -1.56
VMP1-208ENST00000588617 SLC7A11Q9UPY5 501 aa5.3□□□□□ -1.56
VMP1-208ENST00000588617 MAP3K15Q6ZN16 1313 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 IGLV11-55A0A075B6I3 123 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 A0A1B0GTI1 187 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 ISPDA4D126 451 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 ITGB1BP1O14713 200 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 MYL12BO14950 172 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 RAD51BO15315 384 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 IGLV1-47P01700 117 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 CD8AP01732 235 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 PPOXP50336 477 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 RPL23P62829 140 aaKnown RBP5.29□□□□□ -1.56
VMP1-208ENST00000588617 PIGHQ14442 188 aaPredicted RBP5.29□□□□□ -1.56
VMP1-208ENST00000588617 AVPI1Q5T686 147 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 RSBN1Q5VWQ0 802 aaPredicted RBP5.29□□□□□ -1.56
VMP1-208ENST00000588617 Q6ZT83 130 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 MYPOPQ86VE0 399 aaPredicted RBP5.29□□□□□ -1.56
VMP1-208ENST00000588617 SLC34A3Q8N130 599 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 C19orf18Q8NEA5 215 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 OR10G6Q8NH81 332 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 NT5CQ8TCD5 201 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 SFXN5Q8TD22 340 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 RXFP4Q8TDU9 374 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 HSD17B10Q99714 261 aaKnown RBP5.29□□□□□ -1.56
VMP1-208ENST00000588617 TMEM243Q9BU79 118 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 DDIT4Q9NX09 232 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 NKIRAS1Q9NYS0 192 aa5.29□□□□□ -1.56
VMP1-208ENST00000588617 MN1Q10571 1320 aaPredicted RBP5.28□□□□□ -1.56
VMP1-208ENST00000588617 SCN2AQ99250 2005 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 TRAV19A0A0A6YYK7 116 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 GOLGA8IPA6NC78 632 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 J3QT63 122 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 MMP7P09237 267 aaPredicted RBP5.28□□□□□ -1.56
VMP1-208ENST00000588617 HLA-GP17693 338 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 PRKCDQ05655 676 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 INCA1Q0VD86 236 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 PRSS8Q16651 343 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 SYT6Q5T7P8 510 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms