RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 IGHV1-69P01742 117 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 MELTFP08582 738 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 DUX4L2P0CJ85 424 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 DUX4L3P0CJ86 424 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 DUX4L4P0CJ87 422 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 DUX4L5P0CJ88 424 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 DUX4L6P0CJ89 424 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 DUX4L7P0CJ90 424 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 RAP2AP10114 183 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 RAG2P55895 527 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 PDCD1Q15116 288 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 TEX36Q5VZQ5 186 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 DUX4L9Q6RFH8 374 aaPredicted RBP16.9■□□□□ 0.3
TOP3A-219ENST00000584887 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.9■□□□□ 0.3
TOP3A-219ENST00000584887 CLPTM1LQ96KA5 538 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 FAM71F1Q96KD3 344 aaPredicted RBP16.9■□□□□ 0.3
TOP3A-219ENST00000584887 PRDM13Q9H4Q3 707 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 RNPEPL1Q9HAU8 725 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 ONECUT1Q9UBC0 465 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 DUX4Q9UBX2 424 aa16.9■□□□□ 0.3
TOP3A-219ENST00000584887 ANXA2P2A6NMY6 339 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 GNGT2O14610 69 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 SELENOFO60613 162 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 FCN3O75636 299 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 GLCEO94923 617 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 ECDO95905 644 aaPredicted RBP16.89■□□□□ 0.29
TOP3A-219ENST00000584887 OPRL1P41146 370 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 KLHL12Q53G59 568 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 WDR38Q5JTN6 314 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 PLBD1Q6P4A8 553 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 WDR82Q6UXN9 313 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 CD300LDQ6UXZ3 194 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 C11orf53Q8IXP5 236 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 KIR3DL3Q8N743 410 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 FAM216BQ8N7L0 139 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 CSNK2A3Q8NEV1 391 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 OR4F5Q8NH21 305 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 THEM6Q8WUY1 208 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 SEH1LQ96EE3 360 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 CCT8L2Q96SF2 557 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 MICU1Q9BPX6 476 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 CHID1Q9BWS9 393 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 ACOXLQ9NUZ1 547 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 TAS2R1Q9NYW7 299 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 ZNF319Q9P2F9 582 aa16.89■□□□□ 0.29
TOP3A-219ENST00000584887 RPUSD1Q9UJJ7 312 aaKnown RBP16.89■□□□□ 0.29
TOP3A-219ENST00000584887 PRPF19Q9UMS4 504 aaKnown RBP16.89■□□□□ 0.29
TOP3A-219ENST00000584887 PRR23D1E9PI22 279 aaPredicted RBP16.88■□□□□ 0.29
TOP3A-219ENST00000584887 CDIPTO14735 213 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 TIPRLO75663 272 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 PRR23D2P0DMB1 279 aaPredicted RBP16.88■□□□□ 0.29
TOP3A-219ENST00000584887 MUC1P15941 1255 aaPredicted RBP16.88■□□□□ 0.29
TOP3A-219ENST00000584887 CALB2P22676 271 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 NAA10P41227 235 aaPredicted RBP16.88■□□□□ 0.29
TOP3A-219ENST00000584887 IKZF1Q13422 519 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 TREML4Q6UXN2 200 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 C17orf107Q6ZR85 190 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 KCTD8Q6ZWB6 473 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 PRSS45Q7RTY3 260 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 TIGD4Q8IY51 512 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 SSMEM1Q8WWF3 244 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 ASB9Q96DX5 294 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 RTL8AQ9BWD3 113 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 SLITRK2Q9H156 845 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 BEX1Q9HBH7 125 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 PDP1Q9P0J1 537 aaPredicted RBP16.88■□□□□ 0.29
TOP3A-219ENST00000584887 KAAG1Q9UBP8 84 aa16.88■□□□□ 0.29
TOP3A-219ENST00000584887 KCNAB3O43448 404 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 E2F6O75461 281 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 LYNP07948 512 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 RPS7P62081 194 aaKnown RBP16.87■□□□□ 0.29
TOP3A-219ENST00000584887 IL5RAQ01344 420 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 SRSF4Q08170 494 aaKnown RBP16.87■□□□□ 0.29
TOP3A-219ENST00000584887 GINS1Q14691 196 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 SNCBQ16143 134 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 SLC36A1Q7Z2H8 476 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 ADGRG5Q8IZF4 528 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 FTMTQ8N4E7 242 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 TMEM86BQ8N661 226 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 CCDC197Q8NCU1 140 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 OR5T2Q8NGG2 359 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 RGCCQ9H4X1 137 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 CNTD2Q9H8S5 307 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 C1RLQ9NZP8 487 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 DNAJB11Q9UBS4 358 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 MMP24Q9Y5R2 645 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 PKD1L1Q8TDX9 2849 aa16.87■□□□□ 0.29
TOP3A-219ENST00000584887 A0A0U1RQK1 487 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 ZNF850A8MQ14 1090 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.86■□□□□ 0.29
TOP3A-219ENST00000584887 ACOT8O14734 319 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 NDUFB3O43676 98 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 PRDX4Q13162 271 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 GK3PQ14409 553 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 VMO1Q7Z5L0 202 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 TMEM179BQ7Z7N9 219 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 OTOSQ8NHW6 89 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 TBC1D15Q8TC07 691 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 WFDC12Q8WWY7 111 aa16.86■□□□□ 0.29
TOP3A-219ENST00000584887 H1FXQ92522 213 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms