RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, human

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-223	ENST00000584472	SYT3	Q9BQG1	590 aa		13.64	□□□□□ -0.23
CSNK1D-223	ENST00000584472	SOX7	Q9BT81	388 aa		13.64	□□□□□ -0.23
CSNK1D-223	ENST00000584472	COMMD4	Q9H0A8	199 aa		13.64	□□□□□ -0.23
CSNK1D-223	ENST00000584472	DYNLRB1	Q9NP97	96 aa		13.64	□□□□□ -0.23
CSNK1D-223	ENST00000584472	GPR160	Q9UJ42	338 aa		13.64	□□□□□ -0.23
CSNK1D-223	ENST00000584472	INMT	O95050	263 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	CLPTM1	O96005	669 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	F12	P00748	615 aa	Predicted RBP	13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	CPE	P16870	476 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	PRSS12	P56730	875 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	DSCR9	P59020	149 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	GPR50	Q13585	617 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	MOG	Q16653	247 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	CLEC12B	Q2HXU8	276 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	ARMCX4	Q5H9R4	360 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	SYT6	Q5T7P8	510 aa	Predicted RBP	13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472		Q6ZSR3	168 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	COMMD2	Q86X83	199 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	GHSR	Q92847	366 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	UFD1	Q92890	307 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	MUL1	Q969V5	352 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	SORCS2	Q96PQ0	1159 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	VRK1	Q99986	396 aa	Predicted RBP	13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	MRPS26	Q9BYN8	205 aa	Known RBP	13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	RAB1B	Q9H0U4	201 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	MS4A5	Q9H3V2	200 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	VCX3A	Q9NNX9	186 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472	DUSP13	Q9UII6	198 aa		13.63	□□□□□ -0.23
CSNK1D-223	ENST00000584472		A0A1B0GVI7	797 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	LOC107986453	A0A1B0GWG9	222 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472		A0A1W2PPW3	197 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	LOC390937	A0A1W2PQ73	354 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	SYT7	O43581	403 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	SSX4	O60224	188 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	IGHV3-13	P01766	116 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	CSF3	P09919	207 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	JUNB	P17275	347 aa	Predicted RBP	13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	KITLG	P21583	273 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	ACHE	P22303	614 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	PSMB9	P28065	219 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	GSK3A	P49840	483 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	GP2	P55259	537 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	TNK1	Q13470	666 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	OR8B8	Q15620	311 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	LIPK	Q5VXJ0	399 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	OR2T2	Q6IF00	324 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	DOK3	Q7L591	496 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	OR14K1	Q8NGZ2	314 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	OR10AC1	Q8NH08	325 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	NEU4	Q8WWR8	484 aa	Predicted RBP	13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	RGP1	Q92546	391 aa	Predicted RBP	13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	MYEF2	Q9P2K5	600 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	PURG	Q9UJV8	347 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	HHLA2	Q9UM44	414 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	ZNF281	Q9Y2X9	895 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472		V9GYS6	101 aa		13.62	□□□□□ -0.23
CSNK1D-223	ENST00000584472	GGT3P	A6NGU5	568 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	CD300LB	A8K4G0	201 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	IQCF6	A8MYZ5	107 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472		H3BSH0	61 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472		H7C1Q1	480 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	MTRF1	O75570	445 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	DHRS3	O75911	302 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	SELE	P16581	610 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	TST	Q16762	297 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	NKPD1	Q17RQ9	610 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	ALKBH6	Q3KRA9	238 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	CLEC2A	Q6UVW9	174 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	PHC2	Q8IXK0	858 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	CCDC54	Q8NEL0	328 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	OR51A4	Q8NGJ6	313 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	ITFG2	Q969R8	447 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	HIVEP2	P31629	2446 aa		13.61	□□□□□ -0.23
CSNK1D-223	ENST00000584472	ZNF12	P17014	697 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	ACKR3	P25106	362 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	DDOST	P39656	456 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	ALDH3B1	P43353	468 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	MAP2K3	P46734	347 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	RPS11	P62280	158 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	SSX1	Q16384	188 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	YIF1B	Q5BJH7	314 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	SEMA6D	Q8NFY4	1073 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	OR56B2P	Q8NGI1	322 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	OR13C5	Q8NGS8	318 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	SMR3A	Q99954	134 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	TAAR3P	Q9P1P4	343 aa		13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	SF3B6	Q9Y3B4	125 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1D-223	ENST00000584472	FN1	P02751	2386 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1D-223	ENST00000584472	TRIM64B	A6NI03	449 aa		13.59	□□□□□ -0.23
CSNK1D-223	ENST00000584472	DHRS7C	A6NNS2	312 aa		13.59	□□□□□ -0.23
CSNK1D-223	ENST00000584472	CCRL2	O00421	344 aa		13.59	□□□□□ -0.23
CSNK1D-223	ENST00000584472	TIMM8A	O60220	97 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1D-223	ENST00000584472	LMX1B	O60663	402 aa		13.59	□□□□□ -0.23
CSNK1D-223	ENST00000584472	LILRA1	O75019	489 aa		13.59	□□□□□ -0.23
CSNK1D-223	ENST00000584472	LY6G6D	O95868	133 aa		13.59	□□□□□ -0.23
CSNK1D-223	ENST00000584472	TFAP2A	P05549	437 aa		13.59	□□□□□ -0.23
CSNK1D-223	ENST00000584472	LIPA	P38571	399 aa		13.59	□□□□□ -0.23

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