RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PCK1P35558 622 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 FUSP35637 526 aaKnown RBP eCLIP1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 ATP5OP48047 213 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 KLF3P57682 345 aaPredicted RBP1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 LIN9Q5TKA1 542 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 MORN3Q6PF18 240 aaPredicted RBP1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 CDH26Q8IXH8 852 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 OR4M2Q8NGB6 313 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 OR10W1Q8NGF6 305 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 OR9G4Q8NGQ1 327 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 S100PBPQ96BU1 408 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 OTUB2Q96DC9 234 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 DYNLL2Q96FJ2 89 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 NUP58Q9BVL2 599 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 ABCG5Q9H222 651 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 ACP6Q9NPH0 428 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 HPCAL4Q9UM19 191 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 COL5A3P25940 1745 aaPredicted RBP1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 CACNA1DQ01668 2161 aa1.08□□□□□ -2.24
SMCHD1-206ENST00000581631 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 CCL15-CCL14A0A0B4J2E2 113 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 IGKV1-6A0A0C4DH72 117 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 TRBV11-1A0A0K0K1C0 115 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 GOLGA8OA6NCC3 632 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 D6RAR5 112 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 GOLGA8NF8WBI6 632 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 MPHOSPH10O00566 681 aaKnown RBP1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 OVOL1O14753 267 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 CCDC22O60826 627 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 HUS1O60921 280 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 CPSF4O95639 269 aaKnown RBP1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 IGKV1-39P01597 117 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 IGHG2P01859 326 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 IGKV1D-39P04432 117 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 THRAP10827 490 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 MYL2P10916 166 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 MYCNOSP40205 109 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 FABP6P51161 128 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 FMODQ06828 376 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 CCL15Q16663 113 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 C6orf99Q4VX62 202 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 MFSD14CQ5VZR4 134 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 ZYG11AQ6WRX3 759 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 SLC38A4Q969I6 547 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 RPEQ96AT9 228 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 MS4A8Q9BY19 250 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 VSIRQ9H7M9 311 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 COX16Q9P0S2 106 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 RAB22AQ9UL26 194 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 SLC22A7Q9Y694 548 aa1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 COL11A1P12107 1806 aaPredicted RBP1.07□□□□□ -2.24
SMCHD1-206ENST00000581631 LOC102724200A0A096LPH7 203 aaPredicted RBP1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 A0A0A6YYD5 115 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 IZUMO1RA6ND01 250 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 C9JVG2 144 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 H0Y8G0 127 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 SLC16A7O60669 478 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 SLC19A2O60779 497 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 CD160O95971 181 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 TRBV12-3P01733 135 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 FTH1P02794 183 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 GTF2E2P29084 291 aaKnown RBP1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 SULT1E1P49888 294 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 ATP5IP56385 69 aaPredicted RBP1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 PPP1CAP62136 330 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 KRTAP25-1Q3LHN0 102 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 PDZD11Q5EBL8 140 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 LDLRAD2Q5SZI1 272 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 LRRC66Q68CR7 880 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 SPNS3Q6ZMD2 512 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 TTC29Q8NA56 475 aaPredicted RBP1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 OR5AR1Q8NGP9 310 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 RBPMSQ93062 196 aaKnown RBP1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 PRRC1Q96M27 445 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 XPO6Q96QU8 1125 aaKnown RBP1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 C20orf24Q9BUV8 137 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 EMC6Q9BV81 110 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 ZYG11BQ9C0D3 744 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 CA10Q9NS85 328 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 CLN6Q9NWW5 311 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 PLXNB1O43157 2135 aa1.06□□□□□ -2.24
SMCHD1-206ENST00000581631 ANKRD65E5RJM6 399 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 KCNK2O95069 426 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 SNX4O95219 450 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 CBR1P16152 277 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 GABRG2P18507 467 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 NBL1P41271 181 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 MRPL19P49406 292 aaKnown RBP1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 SERPINB8P50452 374 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 OR12D2P58182 307 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 UBE2MP61081 183 aaKnown RBP1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 IL5RAQ01344 420 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 TPBGQ13641 420 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 TMEM236Q5W0B7 351 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 FAM104BQ5XKR9 115 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 TMEM220Q6QAJ8 160 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 SPESP1Q6UW49 350 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 FA2HQ7L5A8 372 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 PAGE2Q7Z2X7 111 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms