RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 CSNK1G1Q9HCP0 422 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 ZNF391Q9UJN7 358 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 SIGLEC7Q9Y286 467 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 HIVEP2P31629 2446 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 CNMDO75829 334 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 GLAP06280 429 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 P0C880 135 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 HSPD1P10809 573 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 SRMP19623 302 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 NTF3P20783 257 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 HMOX2P30519 316 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 MPV17P39210 176 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 RFC3P40938 356 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 IDH2P48735 452 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 FABP6P51161 128 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 MED27Q6P2C8 311 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 OPN5Q6U736 354 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 CD300LGQ6UXG3 332 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 C16orf47Q6ZP98 133 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 LINC00336Q6ZUF6 198 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 JAGN1Q8N5M9 183 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 OR10W1Q8NGF6 305 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 RXFP4Q8TDU9 374 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 ISG20Q96AZ6 181 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 TVP23CQ96ET8 276 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 DYNLL2Q96FJ2 89 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 C18orf15Q96N68 181 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 C1orf50Q9BV19 199 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 RPRD1BQ9NQG5 326 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 PEF1Q9UBV8 284 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 FARSAQ9Y285 508 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 YARS2Q9Y2Z4 477 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 HES2Q9Y543 173 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 UBIAD1Q9Y5Z9 338 aa2.12□□□□□ -2.07
SMCHD1-204ENST00000581226 PLEKHG2Q9H7P9 1386 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 TSPAN11A1L157 253 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 MFNGO00587 321 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 RAD1O60671 282 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 TGM6O95932 706 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 TCP1P17987 556 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 CMC4P56277 68 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 DAOAP59103 153 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 RAB11AP62491 216 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 RAB11BQ15907 218 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 KLHL40Q2TBA0 621 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 DEGS2Q6QHC5 323 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 TMEM136Q6ZRR5 245 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 ZNF547Q8IVP9 402 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 MICU2Q8IYU8 434 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 STK40Q8N2I9 435 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 BBOF1Q8ND07 529 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 OR1L1Q8NH94 360 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 SGTBQ96EQ0 304 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 KCNS1Q96KK3 526 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 OR4K3Q96R72 315 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 KCNS3Q9BQ31 491 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 CYP3A43Q9HB55 503 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 PXMP2Q9NR77 195 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 CARHSP1Q9Y2V2 147 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 LRRC42Q9Y546 428 aa2.11□□□□□ -2.07
SMCHD1-204ENST00000581226 SVILO95425 2214 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 TMEM131Q92545 1883 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 OR6C70A6NIJ9 312 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 PRAMEF26H0Y7S4 382 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 RALBP11234 206 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 PRKACBP22694 351 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 CD82P27701 267 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 PCK1P35558 622 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 GGT2P36268 569 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 MAGEA1P43355 309 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 ATP6V0D1P61421 351 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 IFITM3Q01628 133 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 NAB1Q13506 487 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 FAM53BQ14153 422 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 DOC2AQ14183 400 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 LUZP6Q538Z0 58 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 BEX5Q5H9J7 111 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 PLCXD3Q63HM9 321 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 TMPRSS11AQ6ZMR5 421 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 OTUD6AQ7L8S5 288 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 SGPP2Q8IWX5 399 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 CMTM8Q8IZV2 173 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 OR2Z1Q8NG97 314 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 NAT6Q93015 286 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 CALN1Q9BXU9 219 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 NAA50Q9GZZ1 169 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 PIGUQ9H490 435 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 ZNF586Q9NXT0 402 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 SAR1BQ9Y6B6 198 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 ADGRA3Q8IWK6 1321 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 NEURL4Q96JN8 1562 aa2.1□□□□□ -2.07
SMCHD1-204ENST00000581226 TICRRQ7Z2Z1 1910 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 SCO1O75880 301 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 TDP2O95551 362 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 CD28P10747 220 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 CFHR2P36980 270 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 MYCNOSP40205 109 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 PPICP45877 212 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 GALR1P47211 349 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms