RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 MRPS25P82663 173 aaKnown RBP3.16□□□□□ -1.9
NF1-220ENST00000581113 PUDPQ08623 228 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 CDC20Q12834 499 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 MAD2L1BPQ15013 274 aaPredicted RBP3.16□□□□□ -1.9
NF1-220ENST00000581113 KLHL38Q2WGJ6 581 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 STUMQ69YW2 141 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 PRMT9Q6P2P2 845 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 BTNL3Q6UXE8 466 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 CD300LGQ6UXG3 332 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 TMPRSS11AQ6ZMR5 421 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 LINC00336Q6ZUF6 198 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 ZNF547Q8IVP9 402 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 PGAM4Q8N0Y7 254 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 JAGN1Q8N5M9 183 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 C2orf73Q8N5S3 287 aaPredicted RBP3.16□□□□□ -1.9
NF1-220ENST00000581113 ATP6V0D2Q8N8Y2 350 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 NECAP1Q8NC96 275 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 MDS2Q8NDY4 140 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 CATSPER1Q8NEC5 780 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 OR2L5Q8NG80 312 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 OR4K2Q8NGD2 314 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 SMARCD2Q92925 531 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 UBE2E3Q969T4 207 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 CCDC126Q96EE4 140 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 TMA16Q96EY4 203 aaKnown RBP3.16□□□□□ -1.9
NF1-220ENST00000581113 SNF8Q96H20 258 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 ZNF641Q96N77 438 aaPredicted RBP3.16□□□□□ -1.9
NF1-220ENST00000581113 MICU1Q9BPX6 476 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 NICN1Q9BSH3 213 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 RSG1Q9BU20 258 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 ZNF426Q9BUY5 554 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 RAB34Q9BZG1 259 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 COMMD4Q9H0A8 199 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 CXCL16Q9H2A7 254 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 POLD4Q9HCU8 107 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 ZDHHC4Q9NPG8 344 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 DDX19AQ9NUU7 478 aaKnown RBP3.16□□□□□ -1.9
NF1-220ENST00000581113 MRPL39Q9NYK5 338 aaKnown RBP3.16□□□□□ -1.9
NF1-220ENST00000581113 MAT2BQ9NZL9 334 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 KLRF1Q9NZS2 232 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 IL17CQ9P0M4 197 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 DPM3Q9P2X0 92 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 LSM7Q9UK45 103 aaKnown RBP3.16□□□□□ -1.9
NF1-220ENST00000581113 SLC17A4Q9Y2C5 497 aa3.16□□□□□ -1.9
NF1-220ENST00000581113 CLUHO75153 1309 aa3.15□□□□□ -1.9
NF1-220ENST00000581113 C5orf42Q9H799 3197 aa3.15□□□□□ -1.9
NF1-220ENST00000581113 RALGAPA1Q6GYQ0 2036 aa3.15□□□□□ -1.9
NF1-220ENST00000581113 SMIM28A0A1B0GU29 152 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 TMEM213A2RRL7 107 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 PP2D1A8MPX8 630 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 SIRPB1O00241 398 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 FCN1O00602 326 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 SLC9A3R1O14745 358 aaPredicted RBP3.15□□□□□ -1.91
NF1-220ENST00000581113 DENRO43583 198 aaKnown RBP3.15□□□□□ -1.91
NF1-220ENST00000581113 TOXO94900 526 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 UTS2O95399 124 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 OXTP01178 125 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 P0C879 139 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 CTRB1P17538 263 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 TGM4P49221 684 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 CX3CR1P49238 355 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 C2orf54Q08AI8 447 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 PSMD5Q16401 504 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 IL17AQ16552 155 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 IMPG1Q17R60 797 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 COX19Q49B96 90 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 C9orf129Q5T035 196 aaKnown RBP3.15□□□□□ -1.91
NF1-220ENST00000581113 MEDAGQ5VYS4 303 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 CTRB2Q6GPI1 263 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 LEG1Q6P5S2 330 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 ALKAL1Q6UXT8 129 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 HSD11B1LQ7Z5J1 315 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 APRG1Q8IVJ8 170 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 OR2L13Q8N349 312 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 KIF2BQ8N4N8 673 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 TPRX1Q8N7U7 411 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 TMEM105Q8N8V8 129 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 CCDC112Q8NEF3 446 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 PHF10Q8WUB8 498 aaKnown RBP3.15□□□□□ -1.91
NF1-220ENST00000581113 PHYHIPLQ96FC7 376 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 CENPNQ96H22 339 aaPredicted RBP3.15□□□□□ -1.91
NF1-220ENST00000581113 CELF6Q96J87 481 aaKnown RBP3.15□□□□□ -1.91
NF1-220ENST00000581113 CLCC1Q96S66 551 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 TIPINQ9BVW5 301 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 BCL2L14Q9BZR8 327 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 SYT4Q9H2B2 425 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 MFSD1Q9H3U5 465 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 GLIPR2Q9H4G4 154 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 ISYNA1Q9NPH2 558 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 IFT46Q9NQC8 304 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 EXOSC3Q9NQT5 275 aaKnown RBP3.15□□□□□ -1.91
NF1-220ENST00000581113 PLEKHJ1Q9NW61 149 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 CD274Q9NZQ7 290 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 BFARQ9NZS9 450 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 ZNF282Q9UDV7 671 aaPredicted RBP3.15□□□□□ -1.91
NF1-220ENST00000581113 KLHL21Q9UJP4 597 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 FADS3Q9Y5Q0 445 aa3.15□□□□□ -1.91
NF1-220ENST00000581113 ZDBF2Q9HCK1 2354 aa3.14□□□□□ -1.91
NF1-220ENST00000581113 A0A1B0GW55 424 aa3.14□□□□□ -1.91
NF1-220ENST00000581113 ARGFXA6NJG6 315 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms