RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 MMP7P09237 267 aaPredicted RBP19.23■□□□□ 0.67
PTPRM-211ENST00000580170 GLDNQ6ZMI3 551 aaPredicted RBP19.23■□□□□ 0.67
PTPRM-211ENST00000580170 M0R1B8 84 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 CDK5Q00535 292 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 CLN3Q13286 438 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 XAF1Q6GPH4 301 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 YTHDF2Q9Y5A9 579 aaKnown RBP19.23■□□□□ 0.67
PTPRM-211ENST00000580170 CROCCQ5TZA2 2017 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 MYO5AQ9Y4I1 1855 aaKnown RBP19.23■□□□□ 0.67
PTPRM-211ENST00000580170 CRYM-AS1A6NIL9 109 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 PNLIPRP3Q17RR3 467 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 DEFB108BQ8NET1 73 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 OR4S1Q8NGB4 309 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 KTI12Q96EK9 354 aaPredicted RBP19.23■□□□□ 0.67
PTPRM-211ENST00000580170 IL21Q9HBE4 155 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 LRP12Q9Y561 859 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 AQP7P3A6NL99 342 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 TMEM127O75204 238 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 ATF1P18846 271 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 SLC38A6Q8IZM9 456 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 SLIRPQ9GZT3 109 aaKnown RBP19.23■□□□□ 0.67
PTPRM-211ENST00000580170 FBXO4Q9UKT5 387 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 PROCRQ9UNN8 238 aa19.23■□□□□ 0.67
PTPRM-211ENST00000580170 PEX11BO96011 259 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 DTWD2Q8NBA8 298 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 CPEB3Q8NE35 698 aaKnown RBP19.22■□□□□ 0.67
PTPRM-211ENST00000580170 ATP23Q9Y6H3 246 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 A0A1W2PPC4 97 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 OR5G3P0C626 314 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 TIGITQ495A1 244 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 BTLAQ7Z6A9 289 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 UCK1Q9HA47 277 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 ROBO4Q8WZ75 1007 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 LYRM2Q9NU23 88 aaPredicted RBP19.22■□□□□ 0.67
PTPRM-211ENST00000580170 TRAPPC4Q9Y296 219 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 A0A087WUJ7 227 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 SERTM2A0A1B0GWG4 89 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 TERTO14746 1132 aaKnown RBP19.22■□□□□ 0.67
PTPRM-211ENST00000580170 COX5AP20674 150 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 TAAR6Q96RI8 345 aa19.22■□□□□ 0.67
PTPRM-211ENST00000580170 SLC17A2O00624 439 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 CT45A10P0DMU9 189 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 COL22A1Q8NFW1 1626 aaPredicted RBP19.21■□□□□ 0.67
PTPRM-211ENST00000580170 PMS2P1A4D2B8 440 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 ETFBKMTQ8IXQ9 262 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 OTOSQ8NHW6 89 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 PINX1Q96BK5 328 aaKnown RBP19.21■□□□□ 0.67
PTPRM-211ENST00000580170 FAHP16930 419 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 OR1N1Q8NGS0 311 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 CYSLTR2Q9NS75 346 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 DHHO43323 396 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 GGNBP1Q5YKI7 109 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 ARHGEF39Q8N4T4 335 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 SCMH1Q96GD3 660 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 NUDT9Q9BW91 350 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 GALR2O43603 387 aaPredicted RBP19.21■□□□□ 0.67
PTPRM-211ENST00000580170 GLB1P16278 677 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 TIMD4Q96H15 378 aa19.21■□□□□ 0.67
PTPRM-211ENST00000580170 PHF7Q9BWX1 381 aaPredicted RBP19.21■□□□□ 0.67
PTPRM-211ENST00000580170 C11orf87Q6NUJ2 197 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 DRAM2Q6UX65 266 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 KIAA1958Q8N8K9 716 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 CIB3Q96Q77 187 aaPredicted RBP19.2■□□□□ 0.66
PTPRM-211ENST00000580170 MRPS24Q96EL2 167 aaKnown RBP19.2■□□□□ 0.66
PTPRM-211ENST00000580170 FOXQ1Q9C009 403 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 ITGB4P16144 1822 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 OR7C2O60412 319 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 THBS4P35443 961 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 ERGIC1Q969X5 290 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 HDGFL3Q9Y3E1 203 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 SEMG1P04279 462 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 TMEM196Q5HYL7 178 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 IL20Q9NYY1 176 aa19.2■□□□□ 0.66
PTPRM-211ENST00000580170 GPR37O15354 613 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 IL5P05113 134 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 F2RP25116 425 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 RFC3P40938 356 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 RPL29P47914 159 aaKnown RBP19.19■□□□□ 0.66
PTPRM-211ENST00000580170 TMEM128Q5BJH2 165 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 OR52N4Q8NGI2 321 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 OR8B4Q96RC9 309 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 KIAA1456Q9P272 454 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 PPM1DO15297 605 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 CRYBB2P43320 205 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 FUT6P51993 359 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 RPL7L1Q6DKI1 246 aaKnown RBP19.19■□□□□ 0.66
PTPRM-211ENST00000580170 TIPARPQ7Z3E1 657 aaKnown RBP19.19■□□□□ 0.66
PTPRM-211ENST00000580170 GPR32P1Q8NGA4 272 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 S1PR3Q99500 378 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 PRDM7Q9NQW5 492 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 SLX4Q8IY92 1834 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 SUMO3P55854 103 aaPredicted RBP19.19■□□□□ 0.66
PTPRM-211ENST00000580170 TECTBQ96PL2 329 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 SLC16A12Q6ZSM3 486 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 MMP26Q9NRE1 261 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 LOXL2Q9Y4K0 774 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 A0A0B4J2E0 115 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 A0A1B0GX12 115 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 SERPINE3A8MV23 424 aa19.19■□□□□ 0.66
PTPRM-211ENST00000580170 YIF1AO95070 293 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms