RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 C5orf51A6NDU8 294 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 MPTX1A8MV57 137 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 PNLIPP16233 465 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 FAHP16930 419 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 MPGP29372 298 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 SUMO3P55854 103 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 TMEM50BP56557 158 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 SLC9A3R2Q15599 337 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 OR4K15Q8NH41 348 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 MAFAQ8NHW3 353 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 SAP25Q8TEE9 199 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 VRK1Q99986 396 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 RBM24Q9BX46 236 aaKnown RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF471Q9BX82 626 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ALX4Q9H161 411 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 GAREM1Q9H706 876 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 PNRC2Q9NPJ4 139 aaKnown RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 PTRH2Q9Y3E5 179 aaKnown RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 PATE4P0C8F1 98 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 CD37P11049 281 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 ZBTB25P24278 435 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 NUP62P37198 522 aaPredicted RBP9.24□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF169Q14929 603 aaPredicted RBP9.24□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF468Q5VIY5 522 aaPredicted RBP9.24□□□□□ -0.93
TOP3A-209ENST00000580095 MR1Q95460 341 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 RAB3CQ96E17 227 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 EDEM2Q9BV94 578 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 A0A1W2PNV4 684 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 ADAP1O75689 374 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 BPNT1O95861 308 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 CASRP41180 1078 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 Q7L0L9 218 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 LYG2Q86SG7 212 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 HLA-CQ95604 372 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 PIGTQ969N2 578 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 SHDQ96IW2 340 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 C1orf147Q96MC9 270 aaPredicted RBP9.24□□□□□ -0.93
TOP3A-209ENST00000580095 TMEM68Q96MH6 324 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 PRRT1Q99946 306 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 SMOC1Q9H4F8 434 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF581Q9P0T4 197 aa9.24□□□□□ -0.93
TOP3A-209ENST00000580095 CDC14BO60729 498 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 RPA2P15927 270 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 SERPINA2P20848 420 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 DLSTP36957 453 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 AKR1C2P52895 323 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 AKR1C1Q04828 323 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 SSBP1Q04837 148 aaKnown RBP9.23□□□□□ -0.93
TOP3A-209ENST00000580095 ARFRP1Q13795 201 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 LPAL2Q16609 132 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 RAB12Q6IQ22 244 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 SLC25A47Q6Q0C1 308 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 SLC25A42Q86VD7 318 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 PDZD9Q8IXQ8 264 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 OR5M9Q8NGP3 310 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 FOXRED1Q96CU9 486 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-209ENST00000580095 LYZL4Q96KX0 146 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 OXGR1Q96P68 337 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 TMEM59Q9BXS4 323 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 SLCO5A1Q9H2Y9 848 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 COMMD9Q9P000 198 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 WNT16Q9UBV4 365 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 RNF222A6NCQ9 220 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 TMEM14DPA8MWL7 114 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 EFSO43281 561 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 RAB6AP20340 208 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 RPS18P62269 152 aaKnown RBP9.23□□□□□ -0.93
TOP3A-209ENST00000580095 MPPED2Q15777 294 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 ATRAIDQ6UW56 229 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 GALNTL5Q7Z4T8 443 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 OR6S1Q8NH40 331 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 OR2AE1Q8NHA4 323 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 IFI44Q8TCB0 444 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 PGAM5Q96HS1 289 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 NARS2Q96I59 477 aaKnown RBP9.23□□□□□ -0.93
TOP3A-209ENST00000580095 LDAHQ9H6V9 325 aa9.23□□□□□ -0.93
TOP3A-209ENST00000580095 COLQQ9Y215 455 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-209ENST00000580095 KNTC1P50748 2209 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 A0A0G2JMM0 328 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 A0A1W2PPB8 328 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 A0A1W2PRS3 328 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 KIR3DP1A8MWS1 328 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 TNFSF11O14788 317 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 EIF1BO60739 113 aaKnown RBP9.22□□□□□ -0.93
TOP3A-209ENST00000580095 APOC3P02656 99 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 UMODP07911 640 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 ZP3P21754 424 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 EIF1P41567 113 aaKnown RBP9.22□□□□□ -0.93
TOP3A-209ENST00000580095 MEF2DQ14814 521 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 PCOLCEQ15113 449 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 C11orf87Q6NUJ2 197 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 JMJD6Q6NYC1 403 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-209ENST00000580095 PLXDC2Q6UX71 529 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 BATF2Q8N1L9 274 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 OR6X1Q8NH79 312 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 NANPQ8TBE9 248 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF160Q9HCG1 818 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 AQP7P3A6NL99 342 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 PRSS47A8MTI9 375 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 MSX1P28360 303 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms