RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PARP8Q8N3A8 854 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 SLC26A10Q8NG04 563 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 OR13G1Q8NGZ3 307 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 SGMS2Q8NHU3 365 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 FANK1Q8TC84 345 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 ZNRF4Q8WWF5 429 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 SLCO4A1Q96BD0 722 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 ZNF582Q96NG8 517 aaPredicted RBP5.18□□□□□ -1.58
NUP88-212ENST00000576708 GPX7Q96SL4 187 aaPredicted RBP5.18□□□□□ -1.58
NUP88-212ENST00000576708 COQ7Q99807 217 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 SLC30A2Q9BRI3 323 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 ZNF747Q9BV97 191 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 WDR12Q9GZL7 423 aaKnown RBP5.18□□□□□ -1.58
NUP88-212ENST00000576708 MS4A7Q9GZW8 240 aaPredicted RBP5.18□□□□□ -1.58
NUP88-212ENST00000576708 OR52D1Q9H346 318 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 ANKRD19PQ9H560 264 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 NTN4Q9HB63 628 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 RPRD1BQ9NQG5 326 aaKnown RBP5.18□□□□□ -1.58
NUP88-212ENST00000576708 PAPOLBQ9NRJ5 636 aaKnown RBP5.18□□□□□ -1.58
NUP88-212ENST00000576708 TNFRSF19Q9NS68 423 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 UFSP2Q9NUQ7 469 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 MRPS18AQ9NVS2 196 aaKnown RBP5.18□□□□□ -1.58
NUP88-212ENST00000576708 ADA2Q9NZK5 511 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 OR5V1Q9UGF6 321 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 AURKCQ9UQB9 309 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 AP3M1Q9Y2T2 418 aa5.18□□□□□ -1.58
NUP88-212ENST00000576708 FAM32AQ9Y421 112 aaKnown RBP5.18□□□□□ -1.58
NUP88-212ENST00000576708 TRAV40A0A0B4J280 105 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 IGHV2-70DA0A0C4DH43 119 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 OR6C68A6NDL8 312 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 TVP23AA6NH52 213 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 IQCF6A8MYZ5 107 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 DIRC3C9JPN6 131 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 CCDC22O60826 627 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 PAHP00439 452 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 LCATP04180 440 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 ACSM4P0C7M7 580 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 RHCEP18577 417 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 MDKP21741 143 aaPredicted RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 TUBG1P23258 451 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 FPR3P25089 353 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 PYCR1P32322 319 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 GGT2P36268 569 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 MDH1P40925 334 aaKnown RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 SRP9P49458 86 aaKnown RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 RGS6P49758 472 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 RPS6KA3P51812 740 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 FGF12P61328 243 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 GNB2P62879 340 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 SPIBQ01892 262 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 SRSF4Q08170 494 aaKnown RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 GK2Q14410 553 aaPredicted RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 MPPED2Q15777 294 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 DEFB112Q30KQ8 113 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 RFX4Q33E94 735 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 KRTAP27-1Q3LI81 207 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 ZNF404Q494X3 552 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 CLEC12AQ5QGZ9 265 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 ZNF362Q5T0B9 420 aaPredicted RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 RUSC1-AS1Q66K80 236 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 SFRP4Q6FHJ7 346 aaPredicted RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 HACD2Q6Y1H2 254 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 COLCA1Q6ZS62 124 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 ADCK1Q86TW2 530 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 MUC20Q8N307 709 aaPredicted RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 BOLLQ8N9W6 283 aaKnown RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 SDR9C7Q8NEX9 313 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 GJC3Q8NFK1 279 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 OR52E2Q8NGJ4 325 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 OR51L1Q8NGJ5 315 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 OR5L1Q8NGL2 311 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 OR10S1Q8NGN2 331 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 RAB40AQ8WXH6 277 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 APOBEC3DQ96AK3 386 aaPredicted RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 ZMYND19Q96E35 227 aaPredicted RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 COG8Q96MW5 612 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 PITX2Q99697 317 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 IFT27Q9BW83 186 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 KRTAP9-8Q9BYQ0 159 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 NDEL1Q9GZM8 345 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 HDHD2Q9H0R4 259 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 MYLK2Q9H1R3 596 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 CCDC134Q9H6E4 229 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 UNKLQ9H9P5 680 aaKnown RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 ZMAT3Q9HA38 289 aaKnown RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 PNRC2Q9NPJ4 139 aaKnown RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 TUBG2Q9NRH3 451 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 DCAF13Q9NV06 445 aaKnown RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 TMEM100Q9NV29 134 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 MRPL22Q9NWU5 206 aaKnown RBP5.17□□□□□ -1.58
NUP88-212ENST00000576708 ABCD2Q9UBJ2 740 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 LRCH1Q9Y2L9 728 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 CMYA5Q8N3K9 4069 aa5.17□□□□□ -1.58
NUP88-212ENST00000576708 WNK2Q9Y3S1 2297 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 KIR2DS1A0A191URI9 304 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 A0A1B0GWJ7 208 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 OR10H3O60404 316 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 FCN3O75636 299 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 ZFPL1O95159 310 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 GADD45GO95257 159 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms