RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 NSD1Q96L73 2696 aaPredicted RBP1.44□□□□□ -2.18
CDC27-218ENST00000575830 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.44□□□□□ -2.188e-9■■□□□ 13.9
CDC27-218ENST00000575830 MYO16Q9Y6X6 1858 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 MUC2Q02817 5179 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 ARAP2Q8WZ64 1704 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 IGLV1-36A0A0B4J1U3 117 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 VGLL3A8MV65 326 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 H0YJW9 148 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 PSTPIP1O43586 416 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 CACNG3O60359 315 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 CLPXO76031 633 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 FGGP02679 453 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 CTSLP07711 333 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 OR5H8P0DN80 308 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 CD34P28906 385 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 IFNA8P32881 189 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 KIR3DL2P43630 455 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 PRRX1P54821 245 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 SLC25A11Q02978 314 aaKnown RBP1.44□□□□□ -2.18
CDC27-218ENST00000575830 BST2Q10589 180 aaKnown RBP1.44□□□□□ -2.18
CDC27-218ENST00000575830 CCNJQ5T5M9 372 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 PRAMEF5Q5TYX0 476 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 PRAMEF6Q5VXH4 476 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 PLET1Q6UQ28 207 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 RUFY3Q7L099 469 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 FAM228AQ86W67 206 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 PDIK1LQ8N165 341 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 FBXL13Q8NEE6 735 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 OR9K2Q8NGE7 335 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 OR52K2Q8NGK3 314 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 AKR7LQ8NHP1 331 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 RTN4IP1Q8WWV3 396 aaPredicted RBP1.44□□□□□ -2.18
CDC27-218ENST00000575830 FLYWCH2Q96CP2 140 aaKnown RBP1.44□□□□□ -2.18
CDC27-218ENST00000575830 RASD2Q96D21 266 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 RACGAP1Q9H0H5 632 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 OR52D1Q9H346 318 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 CTSFQ9UBX1 484 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 ING4Q9UNL4 249 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 TMED5Q9Y3A6 229 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 CSDC2Q9Y534 153 aaKnown RBP1.44□□□□□ -2.18
CDC27-218ENST00000575830 TSC2P49815 1807 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 COL4A1P02462 1669 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 RTL1A6NKG5 1358 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 LOC285556D6RIA3 1793 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 SEC16AO15027 2179 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 ACANP16112 2415 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 ZANQ9Y493 2812 aa1.44□□□□□ -2.18
CDC27-218ENST00000575830 DAPK1P53355 1430 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 KIR2DS1A0A191URI9 304 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 ARHGEF35A5YM69 484 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 GOLGA8OA6NCC3 632 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 GOLGA8NF8WBI6 632 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 DYNC1I1O14576 645 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 DPM1O60762 260 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 TPM2P07951 284 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 OR56A5P0C7T3 313 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 PABPC4LP0CB38 370 aaKnown RBP1.43□□□□□ -2.18
CDC27-218ENST00000575830 UBTFL6P0CB48 400 aaPredicted RBP1.43□□□□□ -2.18
CDC27-218ENST00000575830 ATP5IP56385 69 aaPredicted RBP1.43□□□□□ -2.18
CDC27-218ENST00000575830 PRR3P79522 188 aaKnown RBP1.43□□□□□ -2.18
CDC27-218ENST00000575830 HMGN5P82970 282 aaKnown RBP1.43□□□□□ -2.18
CDC27-218ENST00000575830 MEF2BQ02080 365 aaPredicted RBP1.43□□□□□ -2.18
CDC27-218ENST00000575830 SRSF5Q13243 272 aaKnown RBP1.43□□□□□ -2.18
CDC27-218ENST00000575830 CUL2Q13617 745 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 KIR2DS1Q14954 304 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 ZSCAN26Q16670 478 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 IMMTQ16891 758 aaKnown RBP1.43□□□□□ -2.18
CDC27-218ENST00000575830 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 ORMDL2Q53FV1 153 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 SMUG1Q53HV7 270 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 SAXO2Q658L1 398 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 LRRC66Q68CR7 880 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 ZFP1Q6P2D0 407 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 CERS6Q6ZMG9 384 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 OAFQ86UD1 273 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 CALHM1Q8IU99 346 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 LILRB4Q8NHJ6 448 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 PIFOQ8TCI5 191 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 GPR151Q8TDV0 419 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 ZCCHC13Q8WW36 166 aaKnown RBP1.43□□□□□ -2.18
CDC27-218ENST00000575830 SLC25A46Q96AG3 418 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 NAP1L5Q96NT1 182 aaPredicted RBP1.43□□□□□ -2.18
CDC27-218ENST00000575830 SERPINB12Q96P63 405 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 PKIBQ9C010 78 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 DEFB129Q9H1M3 183 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 MFSD1Q9H3U5 465 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 FAM49BQ9NUQ9 324 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 SUN2Q9UH99 717 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 IKZF2Q9UKS7 526 aa1.43□□□□□ -2.18
CDC27-218ENST00000575830 MED13Q9UHV7 2174 aa1.42□□□□□ -2.18
CDC27-218ENST00000575830 EDC4Q6P2E9 1401 aaKnown RBP1.42□□□□□ -2.18
CDC27-218ENST00000575830 WNK1Q9H4A3 2382 aa1.42□□□□□ -2.18
CDC27-218ENST00000575830 RGPD2P0DJD1 1756 aa1.42□□□□□ -2.18
CDC27-218ENST00000575830 MXRA5Q9NR99 2828 aa1.42□□□□□ -2.18
CDC27-218ENST00000575830 MYO7AQ13402 2215 aa1.42□□□□□ -2.18
CDC27-218ENST00000575830 IGHV3OR16-8A0A075B7F1 116 aa1.42□□□□□ -2.18
CDC27-218ENST00000575830 ZNF816-ZNF321PA0A0X1KG74 233 aa1.42□□□□□ -2.18
CDC27-218ENST00000575830 F6UB75 175 aa1.42□□□□□ -2.18
CDC27-218ENST00000575830 DNASE2O00115 360 aaPredicted RBP1.42□□□□□ -2.18
CDC27-218ENST00000575830 ERLIN1O75477 346 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms