RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 OR51F2Q8NH61 342 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 RHOXF1Q8NHV9 184 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 ASB17Q8WXJ9 295 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 OR5P3Q8WZ94 311 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 RORBQ92753 470 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 RAB1CQ92928 201 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 MNTQ99583 582 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 PBOV1Q9GZY1 135 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 OR10A2Q9H208 303 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 METTL17Q9H7H0 456 aaPredicted RBP7.24□□□□□ -1.25
SMG6-216ENST00000575176 SMURF1Q9HCE7 757 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 BRD7Q9NPI1 651 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 MMP26Q9NRE1 261 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 ACOXLQ9NUZ1 547 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 R4GMQ9 66 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 V9GYS6 101 aa7.24□□□□□ -1.25
SMG6-216ENST00000575176 PKD1L1Q8TDX9 2849 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 TRAV20A0A0B4J274 112 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 GGT3PA6NGU5 568 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 ACOD1A6NK06 481 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 SRRM5B3KS81 715 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 C22orf46C9J442 243 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 IFNL4K9M1U5 179 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 IGHA1P01876 353 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 APOC1P02654 83 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 ZNF12P17014 697 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 TNFSF4P23510 183 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 CD80P33681 288 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 CFHR2P36980 270 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 DDOSTP39656 456 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 NANOS3P60323 173 aaKnown RBP7.23□□□□□ -1.25
SMG6-216ENST00000575176 SRSF2Q01130 221 aaKnown RBP7.23□□□□□ -1.25
SMG6-216ENST00000575176 SLC3A1Q07837 685 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 PRDX4Q13162 271 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 TMED1Q13445 227 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 OR8G1Q15617 311 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 ZSCAN26Q16670 478 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 TIGD6Q17RP2 521 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 GFOD2Q3B7J2 385 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 CDONQ4KMG0 1287 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 KLF17Q5JT82 389 aaPredicted RBP7.23□□□□□ -1.25
SMG6-216ENST00000575176 LIPNQ5VXI9 398 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 KRT77Q7Z794 578 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 GLCCI1Q86VQ1 547 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 CATSPERDQ86XM0 798 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 KLBQ86Z14 1044 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 ELMOD2Q8IZ81 293 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 OR1M1Q8NGA1 313 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 OR51E1Q8TCB6 317 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 SPRYD4Q8WW59 207 aaPredicted RBP7.23□□□□□ -1.25
SMG6-216ENST00000575176 ERGIC1Q969X5 290 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 RAB39BQ96DA2 213 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 LGALS12Q96DT0 336 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 SEH1LQ96EE3 360 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 TIMD4Q96H15 378 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 PGAM5Q96HS1 289 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 RAB3IPQ96QF0 476 aaPredicted RBP7.23□□□□□ -1.25
SMG6-216ENST00000575176 TBX5Q99593 518 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 GAL3ST1Q99999 423 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 C9orf16Q9BUW7 83 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 SLC22A4Q9H015 551 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 MOB1AQ9H8S9 216 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 GPR84Q9NQS5 396 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 UFSP2Q9NUQ7 469 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 FAM118AQ9NWS6 357 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 LPAR3Q9UBY5 353 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 ZNF391Q9UJN7 358 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 SLC22A13Q9Y226 551 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 EXOGQ9Y2C4 368 aaKnown RBP7.23□□□□□ -1.25
SMG6-216ENST00000575176 TMEM14AQ9Y6G1 99 aa7.23□□□□□ -1.25
SMG6-216ENST00000575176 TRRAPQ9Y4A5 3859 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 LOC105371242A0A075B767 164 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 TMEM269A0A1B0GVZ9 245 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 ISPDA4D126 451 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 PHF1O43189 567 aaPredicted RBP7.22□□□□□ -1.25
SMG6-216ENST00000575176 DHRS3O75911 302 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 CLIC3O95833 236 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 OR2T7P0C7T2 308 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 DBTP11182 482 aaKnown RBP7.22□□□□□ -1.25
SMG6-216ENST00000575176 ANPEPP15144 967 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 FAHP16930 419 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 MTNR1AP48039 350 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 RIDAP52758 137 aaKnown RBP7.22□□□□□ -1.25
SMG6-216ENST00000575176 CDC42P60953 191 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 ADARB1P78563 741 aaKnown RBP7.22□□□□□ -1.25
SMG6-216ENST00000575176 LCN2P80188 198 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 POU4F2Q12837 409 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 RCN1Q15293 331 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 TAF13Q15543 124 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 SMN1Q16637 294 aaKnown RBP7.22□□□□□ -1.25
SMG6-216ENST00000575176 DMRTC1Q5HYR2 192 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 WDR38Q5JTN6 314 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 OGFRL1Q5TC84 451 aaPredicted RBP7.22□□□□□ -1.25
SMG6-216ENST00000575176 LPCAT4Q643R3 524 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 STUMQ69YW2 141 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 ASPHD2Q6ICH7 369 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 FDX2Q6P4F2 183 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 KCTD18Q6PI47 426 aaPredicted RBP7.22□□□□□ -1.25
SMG6-216ENST00000575176 C1QL2Q7Z5L3 287 aa7.22□□□□□ -1.25
SMG6-216ENST00000575176 MUC20Q8N307 709 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms