RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 GLRA1P23415 457 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 NPBWR1P48145 328 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 RAB32Q13637 225 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 STK11Q15831 433 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 TMPRSS9Q7Z410 1059 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 PEG10Q86TG7 708 aaKnown RBP13.81□□□□□ -0.2
NUP88-207ENST00000573584 OR13G1Q8NGZ3 307 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 OR51F2Q8NH61 342 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 SLC22A11Q9NSA0 550 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 FGF21Q9NSA1 209 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 KLRF1Q9NZS2 232 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 LTBRP36941 435 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 SLC6A9P48067 706 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 DHPSP49366 369 aaPredicted RBP13.81□□□□□ -0.2
NUP88-207ENST00000573584 HOXA1P49639 335 aaPredicted RBP13.81□□□□□ -0.2
NUP88-207ENST00000573584 ZNF41P51814 821 aaPredicted RBP13.81□□□□□ -0.2
NUP88-207ENST00000573584 STT3BQ8TCJ2 826 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 C2orf50Q96LR7 162 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 SLC26A1Q9H2B4 701 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 FAM96BQ9Y3D0 163 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 MBTPS2O43462 519 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 PGA4P0DJD7 388 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 PGA3P0DJD8 388 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 CBX5P45973 191 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 FAM189A2Q15884 450 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 AADACL3Q5VUY0 350 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 Q7L0L9 218 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 SYT13Q7L8C5 426 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 OR51T1Q8NGJ9 327 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 OR10A2Q9H208 303 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 SDHAF3Q9NRP4 125 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 ASXL3Q9C0F0 2248 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 METTL12A8MUP2 240 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 C2CD4DB7Z1M9 353 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 DUX1O43812 170 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 CSTBP04080 98 aaKnown RBP13.8□□□□□ -0.2
NUP88-207ENST00000573584 RAB13P51153 203 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 SNU13P55769 128 aaKnown RBP13.8□□□□□ -0.2
NUP88-207ENST00000573584 CSNK2A1P68400 391 aaPredicted RBP13.8□□□□□ -0.2
NUP88-207ENST00000573584 FAM57BQ71RH2 274 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 LHFPL1Q86WI0 220 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 CSNK2A3Q8NEV1 391 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 NOXO1Q8NFA2 376 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 CPNE2Q96FN4 548 aaPredicted RBP13.8□□□□□ -0.2
NUP88-207ENST00000573584 SLC5A7Q9GZV3 580 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 RHOFQ9HBH0 211 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 PPP4R1LQ9P1A2 415 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 ZNF98A6NK75 572 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 HOXB5P09067 269 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 PET100P0DJ07 73 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 S100A10P60903 97 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 CARFQ8N187 725 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 OR5D18Q8NGL1 313 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 ADAMTS17Q8TE56 1095 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 MAFIPQ8WZ33 124 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 SAT2Q96F10 170 aaPredicted RBP13.8□□□□□ -0.2
NUP88-207ENST00000573584 SLC7A5P2Q9GIP4 190 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 EHFQ9NZC4 300 aa13.8□□□□□ -0.2
NUP88-207ENST00000573584 CEP290O15078 2479 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 PHF3Q92576 2039 aaKnown RBP13.79□□□□□ -0.2
NUP88-207ENST00000573584 PRUNE2Q8WUY3 3088 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 IGKV1-9A0A0C4DH69 117 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 FARS2O95363 451 aaKnown RBP13.79□□□□□ -0.2
NUP88-207ENST00000573584 MYF5P13349 255 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 RFC3P40938 356 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 FOXRED2Q8IWF2 684 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 ZNF283Q8N7M2 679 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 POC1AQ8NBT0 407 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 ZNF501Q96CX3 271 aaPredicted RBP13.79□□□□□ -0.2
NUP88-207ENST00000573584 MRGPRX4Q96LA9 322 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 ZFP57Q9NU63 452 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 DNAJB11Q9UBS4 358 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 OSGIN2Q9Y236 505 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 WIF1Q9Y5W5 379 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 UNC13CQ8NB66 2214 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 BRWD1Q9NSI6 2320 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 MUC1P15941 1255 aaPredicted RBP13.79□□□□□ -0.2
NUP88-207ENST00000573584 DOK3Q7L591 496 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 SMIM8Q96KF7 97 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 NRIP2Q9BQI9 281 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 ACKR4Q9NPB9 350 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 LHX6Q9UPM6 363 aa13.79□□□□□ -0.2
NUP88-207ENST00000573584 A0A1W2PNR3 127 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 LRP3O75074 770 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 KNG1P01042 644 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 SFTPBP07988 381 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 CAV2P51636 162 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 TAS2R46P59540 309 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 PLPPR5Q32ZL2 321 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 RPL7L1Q6DKI1 246 aaKnown RBP13.78□□□□□ -0.2
NUP88-207ENST00000573584 ANKRD37Q7Z713 158 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 NFAM1Q8NET5 270 aaPredicted RBP13.78□□□□□ -0.2
NUP88-207ENST00000573584 TAF9BQ9HBM6 251 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 PNRC2Q9NPJ4 139 aaKnown RBP13.78□□□□□ -0.2
NUP88-207ENST00000573584 RCC2Q9P258 522 aaKnown RBP13.78□□□□□ -0.2
NUP88-207ENST00000573584 TRAF3IP2O43734 574 aaPredicted RBP13.78□□□□□ -0.2
NUP88-207ENST00000573584 RPS2P15880 293 aaKnown RBP13.78□□□□□ -0.2
NUP88-207ENST00000573584 NFYBP25208 207 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 P2RY4P51582 365 aa13.78□□□□□ -0.2
NUP88-207ENST00000573584 ZNF528Q3MIS6 628 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms