RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 MRPL3P09001 348 aaKnown RBP8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 HKR1P10072 659 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 EGR1P18146 543 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 PSMA6P60900 246 aaKnown RBP8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 IL5RAQ01344 420 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 APOFQ13790 326 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 SNAPC1Q16533 368 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 MICBQ29980 383 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 SLC35D3Q5M8T2 416 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 LCN1P1Q5VSP4 162 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 TMEM236Q5W0B7 351 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 RUSC1-AS1Q66K80 236 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 ZNF841Q6ZN19 808 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 FAM90A1Q86YD7 464 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 ZNF454Q8N9F8 522 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 BBS1Q8NFJ9 593 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 OR1M1Q8NGA1 313 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 PIGCQ92535 297 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 DACT3Q96B18 629 aaPredicted RBP8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 RTL8AQ9BWD3 113 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 TTTY10Q9BZA0 68 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 RASSF4Q9H2L5 321 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 RGCCQ9H4X1 137 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 SMURF1Q9HCE7 757 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 PAPOLBQ9NRJ5 636 aaKnown RBP8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 TNFRSF19Q9NS68 423 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 TVP23BQ9NYZ1 205 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 DNAJB9Q9UBS3 223 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 DNAJB11Q9UBS4 358 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 POMPQ9Y244 141 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 RHBDD3Q9Y3P4 386 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 LRP12Q9Y561 859 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 PCDHGB1Q9Y5G3 927 aa8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 SOX21Q9Y651 276 aaPredicted RBP8.02□□□□□ -1.13
NPLOC4-212ENST00000573328 TCRBV3S1A0A5B6 114 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 NKX6-3A6NJ46 265 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 ZNF850A8MQ14 1090 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 ZNF879B4DU55 563 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 P2RY10O00398 339 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 DVL1O14640 695 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 CDIPTO14735 213 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 HOXA3O43365 443 aaPredicted RBP8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 LIPFP07098 398 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 RNASE1P07998 156 aaKnown RBP8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 CFHR2P36980 270 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 CDK5Q00535 292 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 PRDX4Q13162 271 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 SLC9A3R2Q15599 337 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 DEFB112Q30KQ8 113 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 TEX36Q5VZQ5 186 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 KCTD18Q6PI47 426 aaPredicted RBP8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 WDR82Q6UXN9 313 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 C9orf139Q6ZV77 190 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 BTN2A1Q7KYR7 527 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 RHOUQ7L0Q8 258 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 PRSS45Q7RTY3 260 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 SLC36A1Q7Z2H8 476 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 WDR86Q86TI4 376 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 ZDHHC23Q8IYP9 409 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 SCCPDHQ8NBX0 429 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 OR8B12Q8NGG6 310 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 SGMS2Q8NHU3 365 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 GATAD2BQ8WXI9 593 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 DNAJC9Q8WXX5 260 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 C1orf147Q96MC9 270 aaPredicted RBP8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 HIST1H2AAQ96QV6 131 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 CCL13Q99616 98 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 PRRG3Q9BZD7 231 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 PPP1R3EQ9H7J1 279 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 NIPAL2Q9H841 368 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 RNPEPL1Q9HAU8 725 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 SLC25A19Q9HC21 320 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 ABCB9Q9NP78 766 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 ZNF319Q9P2F9 582 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 ONECUT1Q9UBC0 465 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 GTF2A1LQ9UNN4 478 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 KLHDC2Q9Y2U9 406 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 MPC1Q9Y5U8 109 aa8.01□□□□□ -1.13
NPLOC4-212ENST00000573328 PSMD9O00233 223 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 SPRY1O43609 319 aaPredicted RBP8□□□□□ -1.13
NPLOC4-212ENST00000573328 CRYBA1P05813 215 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 MUC1P15941 1255 aaPredicted RBP8□□□□□ -1.13
NPLOC4-212ENST00000573328 ACKR3P25106 362 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 HCCSP53701 268 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 CRISP1P54107 249 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 ARF6P62330 175 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 IL13RA1P78552 427 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 IKZF1Q13422 519 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 WDR38Q5JTN6 314 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 THAP5Q7Z6K1 395 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 PDZD9Q8IXQ8 264 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 FAM216BQ8N7L0 139 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 H1FXQ92522 213 aaKnown RBP8□□□□□ -1.13
NPLOC4-212ENST00000573328 RPL3LQ92901 407 aaKnown RBP8□□□□□ -1.13
NPLOC4-212ENST00000573328 LHX4Q969G2 390 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 ITPKCQ96DU7 683 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 RNF170Q96K19 258 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 WDFY2Q96P53 400 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 PKP2Q99959 881 aa8□□□□□ -1.13
NPLOC4-212ENST00000573328 MROQ9BYG7 248 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms