RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 GBX2P52951 348 aaPredicted RBP4.45□□□□□ -1.7
SF3B3-214ENST00000572365 CXCR4P61073 352 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 CDKL1Q00532 357 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 REEP5Q00765 189 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ACVR1Q04771 509 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 LRRC74AQ0VAA2 488 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 CDH17Q12864 832 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 SLAMF1Q13291 335 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 EXOSC7Q15024 291 aaKnown RBP4.45□□□□□ -1.7
SF3B3-214ENST00000572365 GUSBP1Q15486 140 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 FAM189A2Q15884 450 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF404Q494X3 552 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 SLC25A53Q5H9E4 307 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 PAGE2BQ5JRK9 111 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 BTN2A1Q7KYR7 527 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 THOC6Q86W42 341 aaKnown RBP4.45□□□□□ -1.7
SF3B3-214ENST00000572365 DHFR2Q86XF0 187 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 NKAIN4Q8IVV8 208 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 TBC1D19Q8N5T2 526 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 KIR3DL3Q8N743 410 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 SIGLECL1Q8N7X8 197 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 TRPV3Q8NET8 790 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 STEAP2Q8NFT2 490 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 MCFD2Q8NI22 146 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 DCAKDQ8WVC6 231 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 RORBQ92753 470 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 GTF2H4Q92759 462 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ADIPOR1Q96A54 375 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 TESCQ96BS2 214 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF524Q96C55 264 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 SGTBQ96EQ0 304 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 VPS39Q96JC1 886 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 UHRF2Q96PU4 802 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 SLC29A1Q99808 456 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 HOPXQ9BPY8 73 aaPredicted RBP4.45□□□□□ -1.7
SF3B3-214ENST00000572365 AIF1LQ9BQI0 150 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 NAT9Q9BTE0 207 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 PDCD10Q9BUL8 212 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 PCBD2Q9H0N5 130 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 NCOR1P1Q9H4R4 102 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 TMEM185BQ9H7F4 350 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ANKRA2Q9H9E1 313 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 WDR41Q9HAD4 459 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 SDHAF3Q9NRP4 125 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 TNFRSF19Q9NS68 423 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 MED9Q9NWA0 146 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 SCN3BQ9NY72 215 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 USE1Q9NZ43 259 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 TREM2Q9NZC2 230 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF580Q9UK33 172 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ING4Q9UNL4 249 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 BAIAP2Q9UQB8 552 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ORC6Q9Y5N6 252 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 LEUTXA8MZ59 168 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 PGRMC2O15173 223 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 RGS5O15539 181 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 CXCL13O43927 109 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 BCAS1O75363 584 aaPredicted RBP4.44□□□□□ -1.7
SF3B3-214ENST00000572365 REM1O75628 298 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 SEMA3DO95025 777 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 AIFM1O95831 613 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 IFNB1P01574 187 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 IGHV3-9P01782 118 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 IL6P05231 212 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 RAB4AP20338 218 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 PSMB1P20618 241 aaKnown RBP4.44□□□□□ -1.7
SF3B3-214ENST00000572365 S100PP25815 95 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 SRD5A2P31213 254 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 IER3P46695 156 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 NPY2RP49146 381 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 SNU13P55769 128 aaKnown RBP4.44□□□□□ -1.7
SF3B3-214ENST00000572365 LINC01547P58512 204 aaPredicted RBP4.44□□□□□ -1.7
SF3B3-214ENST00000572365 KRTAP10-3P60369 221 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 ABCE1P61221 599 aaKnown RBP4.44□□□□□ -1.7
SF3B3-214ENST00000572365 STXBP1P61764 594 aaKnown RBP4.44□□□□□ -1.7
SF3B3-214ENST00000572365 HMGCS1Q01581 520 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 SERTAD2Q14140 314 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 PPA1Q15181 289 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 GRK1Q15835 563 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 PPP1R3AQ16821 1122 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 KIAA1644Q3SXP7 199 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 GPAT3Q53EU6 434 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 KHDRBS2Q5VWX1 349 aaKnown RBP4.44□□□□□ -1.7
SF3B3-214ENST00000572365 FAM45BPQ6NSW5 357 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 EPGNQ6UW88 154 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 Q6ZSR9 355 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 BHLHA15Q7RTS1 189 aaPredicted RBP4.44□□□□□ -1.7
SF3B3-214ENST00000572365 SLC16A9Q7RTY1 509 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 C16orf62Q7Z3J2 963 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 P2RY8Q86VZ1 359 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 KLHDC8BQ8IXV7 354 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 FAM9CQ8IZT9 166 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 CADM2Q8N3J6 435 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 KLHDC1Q8N7A1 406 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 ACOT4Q8N9L9 421 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF680Q8NEM1 530 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 OR13C3Q8NGS6 347 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 OR6K3Q8NGY3 331 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 CDC26Q8NHZ8 85 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 PSMA8Q8TAA3 256 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms