RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 SOX21Q9Y651 276 aaPredicted RBP11.35□□□□□ -0.59
PRPF8-202ENST00000571346 TCRBV3S1A0A5B6 114 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 TMPRSS2O15393 492 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 TIPRLO75663 272 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 SFTPBP07988 381 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 APOFQ13790 326 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 SNAPC1Q16533 368 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 SLC35D3Q5M8T2 416 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 GPR157Q5UAW9 335 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 CD276Q5ZPR3 534 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 RUSC1-AS1Q66K80 236 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 KCTD8Q6ZWB6 473 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 PRSS45Q7RTY3 260 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 KRT77Q7Z794 578 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 COMMD2Q86X83 199 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 OR1M1Q8NGA1 313 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 FAM81AQ8TBF8 368 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 SLC7A6OSQ96CW6 309 aaPredicted RBP11.34□□□□□ -0.59
PRPF8-202ENST00000571346 C1orf147Q96MC9 270 aaPredicted RBP11.34□□□□□ -0.59
PRPF8-202ENST00000571346 MICU1Q9BPX6 476 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 RTL8AQ9BWD3 113 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 RASSF4Q9H2L5 321 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 RGCCQ9H4X1 137 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 PPP1R3EQ9H7J1 279 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 SLC25A19Q9HC21 320 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 TVP23BQ9NYZ1 205 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 LRP12Q9Y561 859 aa11.34□□□□□ -0.59
PRPF8-202ENST00000571346 M0R129 80 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 PSMD9O00233 223 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 CDIPTO14735 213 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 PLATP00750 562 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 CFHR2P36980 270 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 CDK5Q00535 292 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 IL5RAQ01344 420 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 PRDX4Q13162 271 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 SNCBQ16143 134 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 MICBQ29980 383 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 LCN1P1Q5VSP4 162 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 METTL11BQ5VVY1 283 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 WDR82Q6UXN9 313 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 RHOUQ7L0Q8 258 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 PNLDC1Q8NA58 520 aaKnown RBP11.33□□□□□ -0.6
PRPF8-202ENST00000571346 OR8B12Q8NGG6 310 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 ZDHHC16Q969W1 377 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
PRPF8-202ENST00000571346 A0A1B0GW55 424 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 ZNF850A8MQ14 1090 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 ZNF879B4DU55 563 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 DVL1O14640 695 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 NDUFA2O43678 99 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 TOX4O94842 621 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 RNASE1P07998 156 aaKnown RBP11.32□□□□□ -0.6
PRPF8-202ENST00000571346 DUX4L2P0CJ85 424 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 DUX4L3P0CJ86 424 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 DUX4L4P0CJ87 422 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 DUX4L5P0CJ88 424 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 DUX4L6P0CJ89 424 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 DUX4L7P0CJ90 424 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 HKR1P10072 659 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 SLC2A5P22732 501 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 ACKR3P25106 362 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 ELF3P78545 371 aaPredicted RBP11.32□□□□□ -0.6
PRPF8-202ENST00000571346 IKZF1Q13422 519 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 SLC9A3R2Q15599 337 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 WDR38Q5JTN6 314 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 TEX36Q5VZQ5 186 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 DUX4L9Q6RFH8 374 aaPredicted RBP11.32□□□□□ -0.6
PRPF8-202ENST00000571346 BTN2A1Q7KYR7 527 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 ZDHHC23Q8IYP9 409 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 FAM216BQ8N7L0 139 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 DNAJC9Q8WXX5 260 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 CNN2Q99439 309 aaKnown RBP11.32□□□□□ -0.6
PRPF8-202ENST00000571346 CCL13Q99616 98 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 PKP2Q99959 881 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 PRRG3Q9BZD7 231 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 NIPAL2Q9H841 368 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 TNFRSF19Q9NS68 423 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 DUX4Q9UBX2 424 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 PCDHGB1Q9Y5G3 927 aa11.32□□□□□ -0.6
PRPF8-202ENST00000571346 NKX6-3A6NJ46 265 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 HOXA3O43365 443 aaPredicted RBP11.31□□□□□ -0.6
PRPF8-202ENST00000571346 LHBP01229 141 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 HCCSP53701 268 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 CRISP1P54107 249 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 FOXL1Q12952 345 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 TUSC1Q2TAM9 212 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 KCTD18Q6PI47 426 aaPredicted RBP11.31□□□□□ -0.6
PRPF8-202ENST00000571346 C11orf53Q8IXP5 236 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 PAPD5Q8NDF8 572 aaKnown RBP11.31□□□□□ -0.6
PRPF8-202ENST00000571346 PIGCQ92535 297 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 TAF15Q92804 592 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRPF8-202ENST00000571346 RPL3LQ92901 407 aaKnown RBP11.31□□□□□ -0.6
PRPF8-202ENST00000571346 SEH1LQ96EE3 360 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 LYZL4Q96KX0 146 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 CADM1Q9BY67 442 aaKnown RBP11.31□□□□□ -0.6
PRPF8-202ENST00000571346 MROQ9BYG7 248 aa11.31□□□□□ -0.6
PRPF8-202ENST00000571346 RNPEPL1Q9HAU8 725 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms