RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ZFHX2Q9C0A1 2572 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-222ENST00000570139 TXNIPQ9H3M7 391 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 FGF20Q9NP95 211 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-222ENST00000570139 DNAJC27Q9NZQ0 273 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 KLK13Q9UKR3 277 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 RASD1Q9Y272 281 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 ERGIC3Q9Y282 383 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 IER3IP1Q9Y5U9 82 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 TRAV17A0A0B4J275 112 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 ZNF99A8MXY4 864 aaPredicted RBP6.11□□□□□ -1.43
CNOT1-222ENST00000570139 B4DXG7 233 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 NPIPA5E9PKD4 350 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 SULT2B1O00204 365 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 PLPP3O14495 311 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 MT-ND2P03891 347 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 SFTPBP07988 381 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 PRKAR1AP10644 381 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 PTNP21246 168 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 PCMT1P22061 227 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 AQP2P41181 271 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 DNASE1L1P49184 302 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 TNFSF10P50591 281 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 RPL27P61353 136 aaKnown RBP6.11□□□□□ -1.43
CNOT1-222ENST00000570139 ACTA2P62736 377 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 ACTG2P63267 376 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 HSF2Q03933 536 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 EMX1Q04741 257 aaPredicted RBP6.11□□□□□ -1.43
CNOT1-222ENST00000570139 LTBQ06643 244 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 KRR1Q13601 381 aaKnown RBP6.11□□□□□ -1.43
CNOT1-222ENST00000570139 PON3Q15166 354 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 OR7A5Q15622 319 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 BCL2A1Q16548 175 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 TIMM50Q3ZCQ8 353 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 NADK2Q4G0N4 442 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 SYT6Q5T7P8 510 aaPredicted RBP6.11□□□□□ -1.43
CNOT1-222ENST00000570139 XAF1Q6GPH4 301 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 CORO6Q6QEF8 472 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 IGFL3Q6UXB1 125 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 COLCA1Q6ZS62 124 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 TMPPEQ6ZT21 453 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 IL17RELQ6ZVW7 336 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 ZNF554Q86TJ5 538 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 MARCH9Q86YJ5 346 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 LRRC17Q8N6Y2 441 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 ARIH2OSQ8N7S6 290 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 PRR26Q8N8Z3 221 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 SLC37A3Q8NCC5 494 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 FAM83FQ8NEG4 500 aaPredicted RBP6.11□□□□□ -1.43
CNOT1-222ENST00000570139 PROKR2Q8NFJ6 384 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 OR13F1Q8NGS4 319 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 OR2T4Q8NH00 348 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 SLC25A36Q96CQ1 311 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 DGCR14Q96DF8 476 aaKnown RBP6.11□□□□□ -1.43
CNOT1-222ENST00000570139 SIGLEC12Q96PQ1 595 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 TSPAN32Q96QS1 320 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 OR5B2Q96R09 309 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 TPPP3Q9BW30 176 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 ISYNA1Q9NPH2 558 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 ACOT13Q9NPJ3 140 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 PAK1IP1Q9NWT1 392 aaPredicted RBP6.11□□□□□ -1.43
CNOT1-222ENST00000570139 TAS2R5Q9NYW4 299 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 ERVK-18Q9QC07 812 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 IL20RAQ9UHF4 553 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 NPIPA1Q9UND3 350 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 STUB1Q9UNE7 303 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 EXOGQ9Y2C4 368 aaKnown RBP6.11□□□□□ -1.43
CNOT1-222ENST00000570139 COX11Q9Y6N1 276 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 EML6Q6ZMW3 1958 aa6.11□□□□□ -1.43
CNOT1-222ENST00000570139 IGLV5-52A0A0A0MRZ9 124 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 A0A1W2PN81 502 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 ANKRD61A6NGH8 418 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 C17orf51A8MQB3 221 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 LRRN3E7EW58 273 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 PHYHO14832 338 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 CLN5O75503 358 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 TRMUO75648 421 aaKnown RBP6.1□□□□□ -1.43
CNOT1-222ENST00000570139 GLSO94925 669 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-222ENST00000570139 ACTL6AO96019 429 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 APOHP02749 345 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-222ENST00000570139 KRT8P05787 483 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 STSP08842 583 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 HTR1AP08908 422 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 HIST1H1CP16403 213 aaKnown RBP6.1□□□□□ -1.43
CNOT1-222ENST00000570139 SLC2A5P22732 501 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 CRABP1P29762 137 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 SOX6P35712 828 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 CHRNA7P36544 502 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 NKX2-1P43699 371 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-222ENST00000570139 GTF2A1P52655 376 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-222ENST00000570139 TMBIM6P55061 237 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 OR2B6P58173 313 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 ERVK-25P63136 954 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 PMP22Q01453 160 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 PLGLB1Q02325 96 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 BDH1Q02338 343 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 COL10A1Q03692 680 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 MRPL28Q13084 256 aaKnown RBP6.1□□□□□ -1.43
CNOT1-222ENST00000570139 FHL2Q14192 279 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 CRMP1Q14194 572 aa6.1□□□□□ -1.43
CNOT1-222ENST00000570139 NEDD8Q15843 81 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms