RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 OR9Q2Q8NGE9 314 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 OR8D4Q8NGM9 314 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 RP9Q8TA86 221 aaKnown RBP9.86□□□□□ -0.83
CAPN3-220ENST00000569827 RPL3LQ92901 407 aaKnown RBP9.86□□□□□ -0.83
CAPN3-220ENST00000569827 TNFRSF14Q92956 283 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 KCNJ15Q99712 375 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 DCTN5Q9BTE1 182 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 FGF23Q9GZV9 251 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-220ENST00000569827 BRD7Q9NPI1 651 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 MEGF11A6BM72 1044 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 OPN1MWP04001 364 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 SEMG1P04279 462 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 OPN1MW2P0DN77 364 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 OPN1MW3P0DN78 364 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 VSIG10L2P0DP72 767 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 RRM2P31350 389 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 GSSP48637 474 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 EFNB2P52799 333 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 PSME3P61289 254 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 HABP2Q14520 560 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-220ENST00000569827 DGUOKQ16854 277 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 TIGD6Q17RP2 521 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 DMRTC1Q5HYR2 192 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 ZBTB37Q5TC79 503 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 STUMQ69YW2 141 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 FAM57BQ71RH2 274 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 SLC36A1Q7Z2H8 476 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 HDXQ7Z353 690 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 CMTM4Q8IZR5 234 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 SLC37A3Q8NCC5 494 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 MRAPQ8TCY5 172 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 SGK3Q96BR1 496 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 REEP6Q96HR9 211 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 GAFA1Q96PS6 74 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 DDOQ99489 341 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 SSX3Q99909 188 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 PAPOLGQ9BWT3 736 aaKnown RBP9.85□□□□□ -0.83
CAPN3-220ENST00000569827 DCAF13Q9NV06 445 aaKnown RBP9.85□□□□□ -0.83
CAPN3-220ENST00000569827 ZNF319Q9P2F9 582 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 AP3M1Q9Y2T2 418 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 CAB39Q9Y376 341 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-220ENST00000569827 RHBDD3Q9Y3P4 386 aa9.85□□□□□ -0.83
CAPN3-220ENST00000569827 A0A1W2PQ09 198 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 AKR7A2O43488 359 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 XRCC2O43543 280 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 ANGPTL7O43827 346 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 CHST1O43916 411 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 MUC1P15941 1255 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-220ENST00000569827 NDUFB7P17568 137 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 TGM4P49221 684 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 ENTPD1P49961 510 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 GUCA2AQ02747 115 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 PPP1R8Q12972 351 aaKnown RBP9.84□□□□□ -0.83
CAPN3-220ENST00000569827 CRMP1Q14194 572 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 PLA1AQ53H76 456 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 LRRC10Q5BKY1 277 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 HCP5Q6MZN7 132 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 PGBD2Q6P3X8 592 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 METAP1DQ6UB28 335 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-220ENST00000569827 SPERTQ8NA61 448 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 OR6K6Q8NGW6 343 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 AMELYQ99218 206 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 HOPXQ9BPY8 73 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-220ENST00000569827 RNPEPL1Q9HAU8 725 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 MRGBPQ9NV56 204 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 HAO2Q9NYQ3 351 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 TAS2R1Q9NYW7 299 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 ABCD2Q9UBJ2 740 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 SLC25A10Q9UBX3 287 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-220ENST00000569827 FBLN5Q9UBX5 448 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 KCNG2Q9UJ96 466 aa9.84□□□□□ -0.83
CAPN3-220ENST00000569827 SAMD4AQ9UPU9 718 aaKnown RBP9.84□□□□□ -0.83
CAPN3-220ENST00000569827 KIAA2026Q5HYC2 2103 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 hCG_38984A0A1B0GV85 526 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 DHRS12A0PJE2 317 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 NKX6-3A6NJ46 265 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 ZNF878C9JN71 531 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 ZNF593O00488 134 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-220ENST00000569827 SOX14O95416 240 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 POU1F1P28069 291 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 GRK5P34947 590 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 GABRA2P47869 451 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 GSK3AP49840 483 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 ZNF121P58317 390 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-220ENST00000569827 ERVFRD-1P60508 538 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 TSPAN31Q12999 210 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 EIF2B1Q14232 305 aaKnown RBP9.83□□□□□ -0.84
CAPN3-220ENST00000569827 KPRPQ5T749 579 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-220ENST00000569827 KCTD8Q6ZWB6 473 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 FAM185AQ8N0U4 392 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 OR51G2Q8NGK0 314 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 OR2T4Q8NH00 348 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 OR4Q3Q8NH05 313 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 OR5R1Q8NH85 324 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 GNPDA2Q8TDQ7 276 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 SPSB4Q96A44 273 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 DUS3LQ96G46 650 aaKnown RBP9.83□□□□□ -0.84
CAPN3-220ENST00000569827 AJUBAQ96IF1 538 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 NKX3-1Q99801 234 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-220ENST00000569827 BTBD10Q9BSF8 475 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms