RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 SLC17A7Q9P2U7 560 aa1.13□□□□□ -2.23
BBS4-215ENST00000569001 CTSFQ9UBX1 484 aa1.13□□□□□ -2.23
BBS4-215ENST00000569001 MTFP1Q9UDX5 166 aa1.13□□□□□ -2.23
BBS4-215ENST00000569001 PCDH11XQ9BZA7 1347 aa1.13□□□□□ -2.23
BBS4-215ENST00000569001 FCGBPQ9Y6R7 5405 aaPredicted RBP1.13□□□□□ -2.23
BBS4-215ENST00000569001 JCADQ9P266 1359 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 ARPC4-TTLL3A0A0A6YYG9 625 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 IGKV1-8A0A0C4DH67 115 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 CENPXA8MT69 81 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 LINC01619G3V211 115 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 PLPP1O14494 284 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 GMDSO60547 372 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 SLC16A7O60669 478 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 CTNSO60931 367 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 MPDU1O75352 247 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 REM1O75628 298 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 VAPBO95292 243 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 ETHE1O95571 254 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 CSTAP01040 98 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 CD74P04233 296 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 S100A9P06702 114 aaKnown RBP1.12□□□□□ -2.23
BBS4-215ENST00000569001 EIF4EP06730 217 aaKnown RBP1.12□□□□□ -2.23
BBS4-215ENST00000569001 KRT16P08779 473 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 OR8U9P0C7N5 309 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 STAG3L2P0CL84 134 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 HOXB8P17481 243 aaPredicted RBP1.12□□□□□ -2.23
BBS4-215ENST00000569001 GABRG2P18507 467 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 PMCHP20382 165 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 IL32P24001 234 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 GABRR2P28476 465 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 PCK1P35558 622 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 RBM34P42696 430 aaKnown RBP1.12□□□□□ -2.23
BBS4-215ENST00000569001 CXCL12P48061 93 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 PSMD8P48556 350 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 GDI2P50395 445 aaKnown RBP1.12□□□□□ -2.23
BBS4-215ENST00000569001 SERPINB8P50452 374 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 BCAP31P51572 246 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 TMED1Q13445 227 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 RCAN2Q14206 197 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 WDR43Q15061 677 aaKnown RBP eCLIP1.12□□□□□ -2.23
BBS4-215ENST00000569001 TMPRSS11AQ6ZMR5 421 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 CALHM1Q8IU99 346 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 KIF2BQ8N4N8 673 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 CSGALNACT2Q8N6G5 542 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 ZFP41Q8N8Y5 198 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 UBAC2Q8NBM4 344 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 FBXO36Q8NEA4 188 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 C19orf18Q8NEA5 215 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 OR51L1Q8NGJ5 315 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 OR6K6Q8NGW6 343 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 OR6N1Q8NGY5 312 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 OR8K3Q8NH51 312 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 OR51E1Q8TCB6 317 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 CA5BP1Q8WTZ4 195 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 C17orf50Q8WW18 174 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 OR8D1Q8WZ84 308 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 PTX4Q96A99 478 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 APH1AQ96BI3 265 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 FLYWCH2Q96CP2 140 aaKnown RBP1.12□□□□□ -2.23
BBS4-215ENST00000569001 HAUS1Q96CS2 278 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 SGTBQ96EQ0 304 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 TVP23CQ96ET8 276 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 ZBED3Q96IU2 234 aaPredicted RBP1.12□□□□□ -2.23
BBS4-215ENST00000569001 ZNF317Q96PQ6 595 aaPredicted RBP1.12□□□□□ -2.23
BBS4-215ENST00000569001 TIMM17AQ99595 171 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 RHOXF2Q9BQY4 288 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 SHANK2-AS3Q9BTD1 123 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 OR2AG1Q9H205 316 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 ARMC7Q9H6L4 198 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 REEP1Q9H902 201 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 TMEM27Q9HBJ8 222 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 TRMT112Q9UI30 125 aaKnown RBP1.12□□□□□ -2.23
BBS4-215ENST00000569001 DDX19BQ9UMR2 479 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 HYOU1Q9Y4L1 999 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 OR51B2Q9Y5P1 312 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 TSSC4Q9Y5U2 329 aaPredicted RBP1.12□□□□□ -2.23
BBS4-215ENST00000569001 ITGB4P16144 1822 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 MYO16Q9Y6X6 1858 aa1.12□□□□□ -2.23
BBS4-215ENST00000569001 TMEM94Q12767 1356 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 A0A0A6YYD5 115 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 IGHV1-69DA0A0B4J2H0 117 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 C5orf63A6NC05 138 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 SYCE1LA8MT33 242 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 HACD1B0YJ81 288 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 E7EWF7 191 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 H7C1H1 209 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 GABRPO00591 440 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 NVLO15381 856 aaKnown RBP1.11□□□□□ -2.23
BBS4-215ENST00000569001 UPK1BO75841 260 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 SLC22A5O76082 557 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 GLSO94925 669 aaPredicted RBP1.11□□□□□ -2.23
BBS4-215ENST00000569001 PLEKHA8P1O95397 391 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 TGM6O95932 706 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 HLA-DQA1P01909 254 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 MBP02144 154 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 CATP04040 527 aaKnown RBP1.11□□□□□ -2.23
BBS4-215ENST00000569001 DTYMKP23919 212 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 ERFP50548 548 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 ETV1P50549 477 aa1.11□□□□□ -2.23
BBS4-215ENST00000569001 PSMD4P55036 377 aaKnown RBP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms