RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 MRM2Q9UI43 246 aaKnown RBP10.96□□□□□ -0.65
CLK3-224ENST00000568605 GNG8Q9UK08 70 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 OR52A1Q9UKL2 312 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 RPL36Q9Y3U8 105 aaKnown RBP10.96□□□□□ -0.65
CLK3-224ENST00000568605 TMEM210A6NLX4 147 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 DHRS7CA6NNS2 312 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 INAFM1C9JVW0 142 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 TMEM178BH3BS89 294 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 LMX1BO60663 402 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 SRSF10O75494 262 aaKnown RBP10.95□□□□□ -0.66
CLK3-224ENST00000568605 DHRS3O75911 302 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 RPP14O95059 124 aaKnown RBP10.95□□□□□ -0.66
CLK3-224ENST00000568605 PTBP3O95758 552 aaKnown RBP10.95□□□□□ -0.66
CLK3-224ENST00000568605 CST4P01036 141 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 TGFAP01135 160 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 IGHV2-5P01817 119 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 TTRP02766 147 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 IL2RGP31785 369 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 SLC34A1Q06495 639 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 RIPPLY1Q0D2K3 151 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 MAB21L1Q13394 359 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 KCNJ8Q15842 424 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 KLHL22Q53GT1 634 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 ZNF691Q5VV52 312 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 PRAMEF6Q5VXH4 476 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 LIPNQ5VXI9 398 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 SSX6Q7RTT6 188 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 KCTD20Q7Z5Y7 419 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 ZDHHC23Q8IYP9 409 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 ELMOD2Q8IZ81 293 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 CCDC54Q8NEL0 328 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 OR51E1Q8TCB6 317 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 C1orf159Q96HA4 380 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 FAM71F1Q96KD3 344 aaPredicted RBP10.95□□□□□ -0.66
CLK3-224ENST00000568605 HIST1H2AAQ96QV6 131 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 ADI1Q9BV57 179 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 VCX3BQ9H321 246 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 TRIM36Q9NQ86 728 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 UFSP2Q9NUQ7 469 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 ENPP5Q9UJA9 477 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 CDC42EP3Q9UKI2 254 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 EXOGQ9Y2C4 368 aaKnown RBP10.95□□□□□ -0.66
CLK3-224ENST00000568605 HSPE1-MOB4S4R3N1 261 aa10.95□□□□□ -0.66
CLK3-224ENST00000568605 ARHGAP32A7KAX9 2087 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 PPIAL4EA0A075B759 164 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 A0A1B0GVI7 797 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 hCG_1807616A0A1W2PRN6 198 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 PPIAL4DF5H284 164 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 H0YAE9 185 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 FAM20BO75063 409 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 FSTL3O95633 263 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 CYB5R3P00387 301 aaPredicted RBP10.94□□□□□ -0.66
CLK3-224ENST00000568605 IGLV3-1P01715 115 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 MSMBP08118 114 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 UBCP0CG48 685 aaKnown RBP10.94□□□□□ -0.66
CLK3-224ENST00000568605 PPIAL4FP0DN26 164 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 CPT2P23786 658 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 ACKR3P25106 362 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 CAPGP40121 348 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 DVL1P1P54792 670 aaPredicted RBP10.94□□□□□ -0.66
CLK3-224ENST00000568605 ZNF85Q03923 595 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 MRPL28Q13084 256 aaKnown RBP10.94□□□□□ -0.66
CLK3-224ENST00000568605 PRDX4Q13162 271 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 CDONQ4KMG0 1287 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 DOK3Q7L591 496 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 C8orf59Q8N0T1 100 aaPredicted RBP10.94□□□□□ -0.66
CLK3-224ENST00000568605 HAVCR2Q8TDQ0 301 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 LGALS12Q96DT0 336 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 ITPKCQ96DU7 683 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 LYZL4Q96KX0 146 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 G6PC2Q9NQR9 355 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 ACOXLQ9NUZ1 547 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 RNF7Q9UBF6 113 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 RHBDD3Q9Y3P4 386 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 PPIAL4AQ9Y536 164 aa10.94□□□□□ -0.66
CLK3-224ENST00000568605 TRAV20A0A0B4J274 112 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 IGHV3-64DA0A0J9YX35 117 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 OR5B21A6NL26 309 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 DLGAP1O14490 977 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 WNT9BO14905 357 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 MAGEB4O15481 346 aaPredicted RBP10.93□□□□□ -0.66
CLK3-224ENST00000568605 PNPP00491 289 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 GRPP07492 148 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 RPS2P15880 293 aaKnown RBP10.93□□□□□ -0.66
CLK3-224ENST00000568605 ZNF12P17014 697 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 LMO4P61968 165 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 MED21Q13503 144 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 ZMYND11Q15326 602 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 CHRFAM7AQ494W8 412 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 TP53I3Q53FA7 332 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 ZNF684Q5T5D7 378 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 KCTD8Q6ZWB6 473 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 NLRC3Q7RTR2 1065 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 LRRC28Q86X40 367 aaPredicted RBP10.93□□□□□ -0.66
CLK3-224ENST00000568605 CATSPERDQ86XM0 798 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 EGFL6Q8IUX8 553 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 TEX29Q8N6K0 151 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 APH1BQ8WW43 257 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 PIGCQ92535 297 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 RORBQ92753 470 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms