RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 MZT1Q08AG7 82 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 TIGD6Q17RP2 521 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 OR6K6Q8NGW6 343 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 LRTOMTQ8WZ04 291 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 H1FXQ92522 213 aaKnown RBP12.74□□□□□ -0.37
NME3-211ENST00000568561 SPSB4Q96A44 273 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 SGK3Q96BR1 496 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 CMTM5Q96DZ9 223 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 REEP6Q96HR9 211 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 NSMCE2Q96MF7 247 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 OPA3Q9H6K4 179 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 RNPEPL1Q9HAU8 725 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 SNTG1Q9NSN8 517 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 hCG_38984A0A1B0GV85 526 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 BTBD17A6NE02 478 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 CDIPTO14735 213 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 NPFFO15130 113 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 NDUFB3O43676 98 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 SOX14O95416 240 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 MUC1P15941 1255 aaPredicted RBP12.73□□□□□ -0.37
NME3-211ENST00000568561 GRK5P34947 590 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 PPP1R8Q12972 351 aaKnown RBP12.73□□□□□ -0.37
NME3-211ENST00000568561 EIF2B1Q14232 305 aaKnown RBP12.73□□□□□ -0.37
NME3-211ENST00000568561 KLHL12Q53G59 568 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 FAM57BQ71RH2 274 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 SLC36A1Q7Z2H8 476 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 Q8N7P7 452 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 OR4Q3Q8NH05 313 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 AMELYQ99218 206 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 ELAC2Q9BQ52 826 aaKnown RBP12.73□□□□□ -0.37
NME3-211ENST00000568561 DCTN5Q9BTE1 182 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 PAPOLGQ9BWT3 736 aaKnown RBP12.73□□□□□ -0.37
NME3-211ENST00000568561 TSSK6Q9BXA6 273 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 WDR13Q9H1Z4 485 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 C16orf95Q9H693 158 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 BRD7Q9NPI1 651 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 ARMC1Q9NVT9 282 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 PRPF19Q9UMS4 504 aaKnown RBP12.73□□□□□ -0.37
NME3-211ENST00000568561 LYVE1Q9Y5Y7 322 aa12.73□□□□□ -0.37
NME3-211ENST00000568561 HSD17B1P14061 328 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 HSD11B1P28845 292 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 SAA4P35542 130 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 DDOSTP39656 456 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 GSK3AP49840 483 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 C2orf68Q2NKX9 166 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 STUMQ69YW2 141 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 RPL13AP3Q6NVV1 102 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 CMTM4Q8IZR5 234 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 NMNAT2Q9BZQ4 307 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 FAM107BQ9H098 131 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 PPA2Q9H2U2 334 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 MED20Q9H944 212 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 IL1RAPQ9NPH3 570 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 IL20Q9NYY1 176 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 ZNF319Q9P2F9 582 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 SIGLEC9Q9Y336 463 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 RHBDD3Q9Y3P4 386 aa12.72□□□□□ -0.37
NME3-211ENST00000568561 PLXNB1O43157 2135 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 MEIOCA2RUB1 952 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 TNFRSF11BO00300 401 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 PAHP00439 452 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 GASTP01350 101 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 EEF1B2P24534 225 aaKnown RBP12.71□□□□□ -0.37
NME3-211ENST00000568561 PRDX6P30041 224 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 GNALP38405 381 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 ZNF121P58317 390 aaPredicted RBP12.71□□□□□ -0.37
NME3-211ENST00000568561 GRB2P62993 217 aaKnown RBP12.71□□□□□ -0.37
NME3-211ENST00000568561 C11orf91Q3C1V1 193 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 ZNF770Q6IQ21 691 aaPredicted RBP12.71□□□□□ -0.37
NME3-211ENST00000568561 METAP1DQ6UB28 335 aaPredicted RBP12.71□□□□□ -0.37
NME3-211ENST00000568561 PRSS45Q7RTY3 260 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 ERI1Q8IV48 349 aaKnown RBP12.71□□□□□ -0.37
NME3-211ENST00000568561 AQP11Q8NBQ7 271 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 OR6N2Q8NGY6 317 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 C17orf50Q8WW18 174 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 RPL3LQ92901 407 aaKnown RBP12.71□□□□□ -0.37
NME3-211ENST00000568561 ITPKCQ96DU7 683 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 ELL3Q9HB65 397 aaPredicted RBP12.71□□□□□ -0.37
NME3-211ENST00000568561 ZNF391Q9UJN7 358 aa12.71□□□□□ -0.37
NME3-211ENST00000568561 CAB39Q9Y376 341 aaPredicted RBP12.71□□□□□ -0.37
NME3-211ENST00000568561 NOTCH3Q9UM47 2321 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 ANKRD61A6NGH8 418 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 NKX6-3A6NJ46 265 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 TSPAN9O75954 239 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 PRB2P02812 416 aaPredicted RBP12.7□□□□□ -0.38
NME3-211ENST00000568561 CSF1P09603 554 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 PAX6P26367 422 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 NAA10P41227 235 aaPredicted RBP12.7□□□□□ -0.38
NME3-211ENST00000568561 SLC15A1P46059 708 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 TGM4P49221 684 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 SLC25A1P53007 311 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 GUCA2AQ02747 115 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 DGUOKQ16854 277 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 LRRC10Q5BKY1 277 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 TEX30Q5JUR7 227 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 SAMD4BQ5PRF9 694 aaKnown RBP12.7□□□□□ -0.38
NME3-211ENST00000568561 LINC01590Q5TEZ4 76 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 SLC35E4Q6ICL7 350 aa12.7□□□□□ -0.38
NME3-211ENST00000568561 CYP2R1Q6VVX0 501 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms