RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 KDM4BO94953 1096 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ALX3O95076 343 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 GTF2F2P13984 249 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF20P17024 532 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 CXCL3P19876 107 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 OTX2P32243 289 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 CYB561P49447 251 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 VEGFCP49767 419 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF84P51523 738 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 UCP3P55916 312 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF121P58317 390 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 HIST1H3AP68431 136 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 HTD2P86397 168 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 LPAL2Q16609 132 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 HFEQ30201 348 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 RNFT1Q5M7Z0 435 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ACER2Q5QJU3 275 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 HIST2H3PS2Q5TEC6 136 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF626Q68DY1 528 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 LAMTOR1Q6IAA8 161 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 STEAP1BQ6NZ63 245 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 Q6ZSR3 168 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 HIST2H3AQ71DI3 136 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 TMEM123Q8N131 208 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 BEST3Q8N1M1 668 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 BEST4Q8NFU0 473 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 OR4D6Q8NGJ1 314 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 OR4C16Q8NGL9 310 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 OR51E1Q8TCB6 317 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF431Q8TF32 576 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 FAM46BQ96A09 425 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 DACT3Q96B18 629 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 C10orf35Q96D05 121 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ADAT3Q96EY9 351 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 JSRP1Q96MG2 331 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 SLC25A21Q9BQT8 299 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF436Q9C0F3 470 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 DLL4Q9NR61 685 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 UPB1Q9UBR1 384 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 FLVCR2Q9UPI3 526 aa6.38□□□□□ -1.39
HERPUD1-209ENST00000564678 SDK2Q58EX2 2172 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 WDFY4Q6ZS81 3184 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 A0A0U1RQV5 110 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 LOC101059948A0A1B0GTJ6 334 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 TMEM82A0PJX8 343 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 LNP1A1A4G5 178 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 FAM25EA8MYX2 175 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 C21orf140B9A014 251 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 OR2C1O95371 312 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 IGLV3-1P01715 115 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 CHRM2P08172 466 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 SELLP14151 372 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 CNR1P21554 472 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF93P35789 620 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 PRKXP51817 358 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 B3GALT5-AS1P59052 145 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 QRFPP83859 136 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 Q0VFX4 171 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 PMPCAQ10713 525 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 SGCAQ16586 387 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 FAM27BQ5VT28 67 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 UTS2BQ765I0 119 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF627Q7L945 461 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 OR2W3Q7Z3T1 314 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 C20orf196Q8IYI0 205 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 SLC7A5P1Q8MH63 180 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF283Q8N7M2 679 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 ZIC4Q8N9L1 334 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 OR8B12Q8NGG6 310 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 OR52N4Q8NGI2 321 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 LILRB4Q8NHJ6 448 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 AQP3Q92482 292 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF385AQ96PM9 386 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF416Q9BWM5 594 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 P4HTMQ9NXG6 502 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 MGAT4AQ9UM21 535 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 HSPB11Q9Y547 144 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 PCDHGA1Q9Y5H4 931 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 VPS13AQ96RL7 3174 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 UBE2QL1A1L167 161 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 TMEM14DPA8MWL7 114 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 TNFSF11O14788 317 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 LMX1BO60663 402 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 OR2A4O95047 310 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 WDPCPO95876 746 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 CYB5AP00167 134 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 CD74P04233 296 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 CD3DP04234 171 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 UBBP0CG47 229 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 CD59P13987 128 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 DNASE1P24855 282 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 OTX1P32242 354 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 CX3CR1P49238 355 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 CARD18P57730 90 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 RPS18P62269 152 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 MRPS34P82930 218 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 ENDOGQ14249 297 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF260Q3ZCT1 412 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 TCEAL6Q6IPX3 200 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 SLC36A1Q7Z2H8 476 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms