RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 PPA2Q9H2U2 334 aa4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 RABEP2Q9H5N1 569 aa4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 IFT22Q9H7X7 185 aa4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 FN3KRPQ9HA64 309 aa4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 NMNAT1Q9HAN9 279 aaPredicted RBP4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 NECAP2Q9NVZ3 263 aa4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 NKIRAS1Q9NYS0 192 aa4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 VSX1Q9NZR4 365 aaPredicted RBP4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 KAAG1Q9UBP8 84 aa4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 GRHPRQ9UBQ7 328 aa4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 RPUSD1Q9UJJ7 312 aaKnown RBP4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 SIGLEC9Q9Y336 463 aa4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 CAB39Q9Y376 341 aaPredicted RBP4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 LHFPL6Q9Y693 200 aa4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 V9GYY5 206 aaPredicted RBP4.29□□□□□ -1.72
AC055855.3-201ENST00000564269 DNAH9Q9NYC9 4486 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 A0A087WUU8 490 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 A0A1B0GW55 424 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 BTBD17A6NE02 478 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 ANKRD61A6NGH8 418 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 F5H5K5 113 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 J3KTA2 159 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DCTN6O00399 190 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 FFAR1O14842 300 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 MGST3O14880 152 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 NPFFO15130 113 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 GMDSO60547 372 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 PTP4A3O75365 173 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 PPP1R3DO95685 299 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 ACSM4P0C7M7 580 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DUX4L2P0CJ85 424 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DUX4L3P0CJ86 424 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DUX4L4P0CJ87 422 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DUX4L5P0CJ88 424 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DUX4L6P0CJ89 424 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DUX4L7P0CJ90 424 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 CA6P23280 308 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 ANOS1P23352 680 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 RPL4P36578 427 aaKnown RBP4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 YAP1P46937 504 aaKnown RBP4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DLX1P56177 255 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 SELENOWP63302 87 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 ELF3P78545 371 aaPredicted RBP4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 PRB3Q04118 309 aaPredicted RBP4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 OR8G1Q15617 311 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 ZBED5Q49AG3 693 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 CYBRD1Q53TN4 286 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 CORO6Q6QEF8 472 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DUX4L9Q6RFH8 374 aaPredicted RBP4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 C1orf122Q6ZSJ8 110 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 ZNF826PQ6ZT77 177 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 PTCHD4Q6ZW05 846 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 TMPRSS11FQ6ZWK6 438 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 MBOAT2Q6ZWT7 520 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 PGAP1Q75T13 922 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 LYG1Q8N1E2 194 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 PQLC1Q8N2U9 271 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 PNKDQ8N490 385 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 KLHDC1Q8N7A1 406 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 Q8N7P7 452 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 OR5R1Q8NH85 324 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 SPRYD4Q8WW59 207 aaPredicted RBP4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 ST8SIA4Q92187 359 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 SGCDQ92629 289 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 TNFRSF14Q92956 283 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 PHF21AQ96BD5 680 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 TLCD1Q96CP7 247 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 ZNF583Q96ND8 569 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 ZNF570Q96NI8 536 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 TSSK2Q96PF2 358 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 SLC22A4Q9H015 551 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 RERGLQ9H628 205 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 NRIP3Q9NQ35 241 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 TRIM36Q9NQ86 728 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 C1orf123Q9NWV4 160 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 ONECUT1Q9UBC0 465 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 RHCGQ9UBD6 479 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DNAJB11Q9UBS4 358 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 DUX4Q9UBX2 424 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 SCOCQ9UIL1 159 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 RPS6KA6Q9UK32 745 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 SNX13Q9Y5W8 968 aa4.28□□□□□ -1.72
AC055855.3-201ENST00000564269 IGHV3OR15-7A0A075B7D8 119 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 IGLV1-36A0A0B4J1U3 117 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 A0A1W2PRD5 423 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 A0A1W2PRF3 423 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 A0A1W2PRM7 423 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 MEIOCA2RUB1 952 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 CD300LBA8K4G0 201 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 FXYD1O00168 92 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 SOCS2O14508 198 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 XPNPEP2O43895 674 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 IFNA14P01570 189 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 LCATP04180 440 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 GRPP07492 148 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 EEF1B2P24534 225 aaKnown RBP4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 CRABP1P29762 137 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 KDELR2P33947 212 aa4.27□□□□□ -1.73
AC055855.3-201ENST00000564269 SAA4P35542 130 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms