RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 DGUOKQ16854 277 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 GLYATL3Q5SZD4 288 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 C11orf88Q6PI97 169 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 WDR82Q6UXN9 313 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 TMPRSS11FQ6ZWK6 438 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.38□□□□□ -1.07
SF3B3-204ENST00000563739 C11orf42Q8N5U0 333 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 ACOT11Q8WXI4 607 aaPredicted RBP8.38□□□□□ -1.07
SF3B3-204ENST00000563739 DMRTB1Q96MA1 342 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 HCAR1Q9BXC0 346 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 CADM1Q9BY67 442 aaKnown RBP8.38□□□□□ -1.07
SF3B3-204ENST00000563739 C1orf21Q9H246 121 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 NMNAT1Q9HAN9 279 aaPredicted RBP8.38□□□□□ -1.07
SF3B3-204ENST00000563739 ELL3Q9HB65 397 aaPredicted RBP8.38□□□□□ -1.07
SF3B3-204ENST00000563739 MRPL22Q9NWU5 206 aaKnown RBP8.38□□□□□ -1.07
SF3B3-204ENST00000563739 GAR1Q9NY12 217 aaKnown RBP8.38□□□□□ -1.07
SF3B3-204ENST00000563739 BAG5Q9UL15 447 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 NKX6-3A6NJ46 265 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 SOCS2O14508 198 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 GMDSO60547 372 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 ATP6V1G2O95670 118 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 NCK1P16333 377 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 RPS27P42677 84 aaKnown RBP8.37□□□□□ -1.07
SF3B3-204ENST00000563739 GUCA1AP43080 201 aaPredicted RBP8.37□□□□□ -1.07
SF3B3-204ENST00000563739 GUCA2AQ02747 115 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 ACSM1Q08AH1 577 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 KCNJ8Q15842 424 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 LRRC75BQ2VPJ9 315 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 ANKDD1AQ495B1 522 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 SPATS1Q496A3 300 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 ZBED5Q49AG3 693 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 KLHL12Q53G59 568 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 NKAPLQ5M9Q1 402 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 ATPAF1Q5TC12 328 aaPredicted RBP8.37□□□□□ -1.07
SF3B3-204ENST00000563739 LYPD4Q6UWN0 246 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 PGAP1Q75T13 922 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 VTCN1Q7Z7D3 282 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 OR6V1Q8N148 313 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 ARHGAP24Q8N264 748 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 GJC3Q8NFK1 279 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 OR4S1Q8NGB4 309 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 OR56B2PQ8NGI1 322 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 OR2T6Q8NHC8 308 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 SLC7A13Q8TCU3 470 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 LRRC29Q8WV35 223 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 ZNRF4Q8WWF5 429 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 FAM162AQ96A26 154 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 CDRT15Q96T59 188 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 TLNRD1Q9H1K6 362 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 WDR13Q9H1Z4 485 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 RERGLQ9H628 205 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 GRHPRQ9UBQ7 328 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 CD300AQ9UGN4 299 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 CYB5R1Q9UHQ9 305 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 MAGEL2Q9UJ55 1249 aa8.37□□□□□ -1.07
SF3B3-204ENST00000563739 HTR3EA5X5Y0 456 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 F5H5K5 113 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 ARPC2O15144 300 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 ZNF682O95780 498 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 SERPINA1P01009 418 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 GRPP07492 148 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 CD83Q01151 205 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 ST3GAL3Q11203 375 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 IKZF1Q13422 519 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 AANATQ16613 207 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 RFX4Q33E94 735 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 DNAL1Q4LDG9 190 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 PGBD2Q6P3X8 592 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 ZNF788Q6ZQV5 615 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 MBOAT2Q6ZWT7 520 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 CBLL1Q75N03 491 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 OR5T2Q8NGG2 359 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 LZICQ8WZA0 190 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 TPD52L3Q96J77 140 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 HSH2DQ96JZ2 352 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 ATF6BQ99941 703 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 CDCA4Q9BXL8 241 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 FN3KQ9H479 309 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 MRPL15Q9P015 296 aaKnown RBP8.36□□□□□ -1.07
SF3B3-204ENST00000563739 B9D1Q9UPM9 204 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 CAB39Q9Y376 341 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-204ENST00000563739 IER3IP1Q9Y5U9 82 aa8.36□□□□□ -1.07
SF3B3-204ENST00000563739 A6NDX4 124 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 A6NLC8 198 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 M0R135 149 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 M0R1W7 72 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 XKRYO14609 159 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 GMNNO75496 209 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 LCATP04180 440 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 MUC1P15941 1255 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-204ENST00000563739 JUNBP17275 347 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-204ENST00000563739 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-204ENST00000563739 OMPP47874 163 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 ERVFRD-1P60508 538 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 SELENOWP63302 87 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 TRAM2Q15035 370 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 SNCBQ16143 134 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 IFI44LQ53G44 452 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 GLYATQ6IB77 296 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 ETV3LQ6ZN32 361 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms