RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 IKZF2Q9UKS7 526 aa5.23□□□□□ -1.57
CNOT1-204ENST00000563130 N6AMT1Q9Y5N5 214 aa5.23□□□□□ -1.57
CNOT1-204ENST00000563130 R4GMQ9 66 aa5.23□□□□□ -1.57
CNOT1-204ENST00000563130 HSPE1-MOB4S4R3N1 261 aa5.23□□□□□ -1.57
CNOT1-204ENST00000563130 MTORP42345 2549 aa5.23□□□□□ -1.57
CNOT1-204ENST00000563130 ZANQ9Y493 2812 aa5.23□□□□□ -1.57
CNOT1-204ENST00000563130 GMDSO60547 372 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 CDC14BO60729 498 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 FBXO24O75426 580 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 TTRP02766 147 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 GNAO1P09471 354 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 ACKR3P25106 362 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 CAPGP40121 348 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 CD200P41217 278 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 ACTC1P68032 377 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 ACTA1P68133 377 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 RAB40BQ12829 278 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 CARTPTQ16568 116 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 SMN1Q16637 294 aaKnown RBP5.22□□□□□ -1.57
CNOT1-204ENST00000563130 TMEM249Q2WGJ8 235 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 HFEQ30201 348 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 ZNF829Q3KNS6 432 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-204ENST00000563130 CDONQ4KMG0 1287 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 LIPNQ5VXI9 398 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 LAIR2Q6ISS4 152 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 PLEKHG7Q6ZR37 379 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 Q6ZSR3 168 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 KLBQ86Z14 1044 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 EGFL6Q8IUX8 553 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 ELMOD2Q8IZ81 293 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 OR10AD1Q8NGE0 317 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 ITLN1Q8WWA0 313 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 RORBQ92753 470 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 PPP1R14AQ96A00 147 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 C7orf69Q9H7B7 122 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 MOB1AQ9H8S9 216 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 GCM1Q9NP62 436 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 MYRFQ9Y2G1 1151 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 RPL36Q9Y3U8 105 aaKnown RBP5.22□□□□□ -1.57
CNOT1-204ENST00000563130 PCDHGB1Q9Y5G3 927 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 GGT3PA6NGU5 568 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 METTL15A6NJ78 407 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 F5H5P2 479 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 FAM20BO75063 409 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 LY6G6DO95868 133 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 KRT8P05787 483 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 HEXAP06865 529 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 CA6P23280 308 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 TNFSF4P23510 183 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 GPR6P46095 362 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-204ENST00000563130 SRP9P49458 86 aaKnown RBP5.22□□□□□ -1.57
CNOT1-204ENST00000563130 IL5RAQ01344 420 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 ZNF181Q2M3W8 571 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 KCTD20Q7Z5Y7 419 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 ACBD7Q8N6N7 88 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 SETD9Q8NE22 299 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 CSNK2A3Q8NEV1 391 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 CNIH3Q8TBE1 160 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 CYGBQ8WWM9 190 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 CCL17Q92583 94 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 C1orf159Q96HA4 380 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 JAM3Q9BX67 310 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 VCXQ9H320 206 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 TMEM106BQ9NUM4 274 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 DCAF16Q9NXF7 216 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 PPP1R3CQ9UQK1 317 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 NOP16Q9Y3C1 178 aaKnown RBP5.22□□□□□ -1.57
CNOT1-204ENST00000563130 WIPI2Q9Y4P8 454 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 SNX5Q9Y5X3 404 aa5.22□□□□□ -1.57
CNOT1-204ENST00000563130 YLPM1P49750 1951 aaKnown RBP5.22□□□□□ -1.57
CNOT1-204ENST00000563130 ABCA1O95477 2261 aa5.21□□□□□ -1.57
CNOT1-204ENST00000563130 TANC2Q9HCD6 1990 aa5.21□□□□□ -1.57
CNOT1-204ENST00000563130 A0A1B0GTI1 187 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 DAPL1A0PJW8 107 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 CLDN25C9JDP6 229 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 LOC110117498-PIK3R3F6TDL0 507 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 H0YHG0 523 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 WNT9BO14905 357 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 FSTL3O95633 263 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 FADS2O95864 444 aaKnown RBP5.21□□□□□ -1.58
CNOT1-204ENST00000563130 CST4P01036 141 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 IGLV1-40P01703 118 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 ATP6V1B1P15313 513 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 CCL1P22362 96 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 PMELP40967 661 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 OR12D2P58182 307 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 HNRNPA0Q13151 305 aaKnown RBP5.21□□□□□ -1.58
CNOT1-204ENST00000563130 GALEQ14376 348 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 CATSPERDQ86XM0 798 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 YIPF7Q8N8F6 280 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 SPERTQ8NA61 448 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 OR52I1Q8NGK6 324 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 OR51E1Q8TCB6 317 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 Q8TCH9 128 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 ERGIC1Q969X5 290 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 ADAT1Q9BUB4 502 aaKnown RBP5.21□□□□□ -1.58
CNOT1-204ENST00000563130 FGF20Q9NP95 211 aaPredicted RBP5.21□□□□□ -1.58
CNOT1-204ENST00000563130 GPR84Q9NQS5 396 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 INPP5EQ9NRR6 644 aa5.21□□□□□ -1.58
CNOT1-204ENST00000563130 ACOXLQ9NUZ1 547 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms