RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SMIM3Q9BZL3 60 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 FOXQ1Q9C009 403 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 RXFP3Q9NSD7 469 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 GSKIPQ9P0R6 139 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 A0A0J9YY10 115 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 A0A1W2PPC4 97 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 OR4C45A6NMZ5 311 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 DLEU1O43261 78 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 CD37P11049 281 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 S1PR1P21453 382 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 FHITP49789 147 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 ERVFRD-1P60508 538 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 RASGEF1BQ0VAM2 473 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 PMPCAQ10713 525 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 COTL1Q14019 142 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 JOSD1Q15040 202 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 SLC9A3R2Q15599 337 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 C4orf17Q53FE4 359 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 SOHLH1Q5JUK2 328 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 JAGN1Q8N5M9 183 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 COMMD1Q8N668 190 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 THOC3Q96J01 351 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 COMMD4Q9H0A8 199 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 SLC25A31Q9H0C2 315 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 NELFAQ9H3P2 528 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 ZNF705GA8MUZ8 300 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 PEX12O00623 359 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 CHATP28329 748 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 CCKBRP32239 447 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 NPEPL1Q8NDH3 523 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 MARCH1Q8TCQ1 289 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 ABHD5Q8WTS1 349 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 FRZBQ92765 325 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 ZNF587Q96SQ5 575 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 CACNA1CQ13936 2221 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 RAB27BO00194 218 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 PRKNO60260 465 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 TAGLN2P37802 199 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 MAP3K8P41279 467 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 MFSD8Q8NHS3 518 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 NKD1Q969G9 470 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 MCHR2Q969V1 340 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 OR10C1Q96KK4 312 aa12.48□□□□□ -0.41
GTF3C1-203ENST00000562609 DUXAA6NLW8 204 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 CYR61O00622 381 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 IL18BPO95998 194 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 NGFRP08138 427 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 HRH1P35367 487 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 DUSP8Q13202 625 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 ISXQ2M1V0 245 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 GXYLT1Q4G148 440 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 ARMC6Q6NXE6 501 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 LEG1Q6P5S2 330 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 OOSP2Q86WS3 158 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 ZNF595Q8IYB9 648 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 TERB2Q8NHR7 220 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 RNF128Q8TEB7 428 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 RASD2Q96D21 266 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 STACQ99469 402 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 FAM212BQ9NTI7 297 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 IL17BQ9UHF5 180 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 FBXL21Q9UKT6 434 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 THADAQ6YHU6 1953 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 KIR2DS5A0A0G2JLQ3 304 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 A0A0G2JNG1 304 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 KIR2DS3K7RE56 304 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 HRKO00198 91 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 NDUFB2O95178 105 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 CAMLGP49069 296 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 KIR2DS5Q14953 304 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 NNATQ16517 81 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 THEM4Q5T1C6 240 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 ZAR1Q86SH2 424 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 PRSS58Q8IYP2 241 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 SUMF2Q8NBJ7 301 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 LMX1AQ8TE12 382 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 SDF2Q99470 211 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 ALG12Q9BV10 488 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 METTL8Q9H825 291 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 CUTCQ9NTM9 273 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 FBXL17Q9UF56 701 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 ZNF107Q9UII5 783 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 IGHV1OR15-9A0A0B4J2B8 117 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 MED19A0JLT2 244 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 C4orf47A7E2U8 309 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 GMFGO60234 142 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 DOK2O60496 412 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 UCP2P55851 309 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 TOMM20Q15388 145 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 GLYATL3Q5SZD4 288 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 RPUSD3Q6P087 351 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 MED25Q71SY5 747 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 SYT13Q7L8C5 426 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 TRAPPC6BQ86SZ2 158 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 FJX1Q86VR8 437 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 THNSL2Q86YJ6 484 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 CA13Q8N1Q1 262 aa12.47□□□□□ -0.41
GTF3C1-203ENST00000562609 M0R143 59 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 SYT7O43581 403 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms