RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 COPZ2Q9P299 210 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 MTFP1Q9UDX5 166 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 NAP1L6A6NFF2 107 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 RAB27BO00194 218 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 SERPINA5P05154 406 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
SNX1-211ENST00000560829 IGHV1-2P23083 117 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 PRSS3P35030 304 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 OR3A4PP47883 348 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 GSG1Q2KHT4 349 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 OLFML2AQ68BL7 652 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 GLCCI1Q86VQ1 547 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 PNLDC1Q8NA58 520 aaKnown RBP11.19□□□□□ -0.62
SNX1-211ENST00000560829 KCNG3Q8TAE7 436 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 GPX8Q8TED1 209 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 FAM46BQ96A09 425 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 APOBEC3DQ96AK3 386 aaPredicted RBP11.19□□□□□ -0.62
SNX1-211ENST00000560829 ABHD17AQ96GS6 310 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 DPAGT1Q9H3H5 408 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 SCPEP1Q9HB40 452 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 NEK6Q9HC98 313 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 HRASLSQ9HDD0 168 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 TAS2R8Q9NYW2 309 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 A0A0B4J293 547 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 C5orf49A4QMS7 147 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 RRP8O43159 456 aaKnown RBP11.19□□□□□ -0.62
SNX1-211ENST00000560829 GMDSO60547 372 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 RBBP9O75884 186 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 TRAPPC2P0DI81 140 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 TRAPPC2BP0DI82 140 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 COX5AP20674 150 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 PTGER4P35408 488 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 PTGFRP43088 359 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 BTG1P62324 171 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 CNN3Q15417 329 aaKnown RBP11.19□□□□□ -0.62
SNX1-211ENST00000560829 FAM189A2Q15884 450 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 TBR1Q16650 682 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 KRTCAP3Q53RY4 240 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 CLVS2Q5SYC1 327 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 CDH24Q86UP0 819 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 GPER1Q99527 375 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 REPIN1Q9BWE0 567 aaKnown RBP11.19□□□□□ -0.62
SNX1-211ENST00000560829 PLSCR4Q9NRQ2 329 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 ETAA1Q9NY74 926 aa11.19□□□□□ -0.62
SNX1-211ENST00000560829 MYEF2Q9P2K5 600 aaKnown RBP11.19□□□□□ -0.62
SNX1-211ENST00000560829 WDR1O75083 606 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 CRHP06850 196 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 CHRM2P08172 466 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 MELTFP08582 738 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 PRKACBP22694 351 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 GABRA6Q16445 453 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 MOGAT2Q3SYC2 334 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 RSBN1Q5VWQ0 802 aaPredicted RBP11.18□□□□□ -0.62
SNX1-211ENST00000560829 ZNF324BQ6AW86 544 aaPredicted RBP11.18□□□□□ -0.62
SNX1-211ENST00000560829 ZNF585AQ6P3V2 769 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 SEM1Q6ZVN7 128 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 ZNF101Q8IZC7 436 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 C1orf162Q8NEQ5 155 aaPredicted RBP11.18□□□□□ -0.62
SNX1-211ENST00000560829 UBASH3BQ8TF42 649 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 AQP3Q92482 292 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 CPNE2Q96FN4 548 aaPredicted RBP11.18□□□□□ -0.62
SNX1-211ENST00000560829 TECTBQ96PL2 329 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 LPAR5Q9H1C0 372 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 OPA3Q9H6K4 179 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 GPR173Q9NS66 373 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 NUBP2Q9Y5Y2 271 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 DNAJC13O75165 2243 aa11.18□□□□□ -0.62
SNX1-211ENST00000560829 ZNF816-ZNF321PA0A0X1KG74 233 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 WIPF3A6NGB9 483 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 INMT-MINDY4F8WBC2 141 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 J3QW42 95 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 CDC14BO60729 498 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 TNFSF13O75888 250 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 MT-ND4P03905 459 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 TCRBP04435 133 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 LPLP06858 475 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 CSF1P09603 554 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 APLNRP35414 380 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 RAG2P55895 527 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 VWA1Q6PCB0 445 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 MDP1Q86V88 176 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 CNEP1R1Q8N9A8 125 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 SEH1LQ96EE3 360 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 CACNG6Q9BXT2 260 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 TP53TG5Q9Y2B4 290 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 TNRC6AQ8NDV7 1962 aaKnown RBP11.17□□□□□ -0.62
SNX1-211ENST00000560829 BOLA2-SMG1P6H3BVE0 249 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 ICMTO60725 284 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 CGAP01215 116 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 CCNOP22674 350 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 GIFP27352 417 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 HLA-DMAP28067 261 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 ZP1P60852 638 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 FOXF2Q12947 444 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 MALLQ13021 153 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 GK2Q14410 553 aaPredicted RBP11.17□□□□□ -0.62
SNX1-211ENST00000560829 TATDN3Q17R31 274 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 EIF2S3LQ2VIR3 472 aaKnown RBP11.17□□□□□ -0.62
SNX1-211ENST00000560829 LHFPL2Q6ZUX7 228 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms