RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 FAM81AQ8TBF8 368 aa11.73□□□□□ -0.53
TPM1-223ENST00000560445 THEM6Q8WUY1 208 aa11.73□□□□□ -0.53
TPM1-223ENST00000560445 ZNRF4Q8WWF5 429 aa11.73□□□□□ -0.53
TPM1-223ENST00000560445 DACT3Q96B18 629 aaPredicted RBP11.73□□□□□ -0.53
TPM1-223ENST00000560445 FAM71F1Q96KD3 344 aaPredicted RBP11.73□□□□□ -0.53
TPM1-223ENST00000560445 ESM1Q9NQ30 184 aa11.73□□□□□ -0.53
TPM1-223ENST00000560445 DNAJC27Q9NZQ0 273 aa11.73□□□□□ -0.53
TPM1-223ENST00000560445 LAMP5Q9UJQ1 280 aa11.73□□□□□ -0.53
TPM1-223ENST00000560445 A0A1B0GUS0 222 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 NKX6-3A6NJ46 265 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 POM121CA8CG34 1229 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 TOX4O94842 621 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 CRYBA1P05813 215 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 ATP6V1B1P15313 513 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 CFHR2P36980 270 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 ACTR3P61158 418 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 FGF12P61328 243 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 CBX1P83916 185 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 DBPQ10586 325 aaPredicted RBP11.72□□□□□ -0.53
TPM1-223ENST00000560445 GFOD2Q3B7J2 385 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 FAM201AQ5SY85 155 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 TMEM86BQ8N661 226 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 OR10Z1Q8NGY1 313 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 LRRC29Q8WV35 223 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 GATAD2BQ8WXI9 593 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 ASB17Q8WXJ9 295 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 SGK3Q96BR1 496 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 MROQ9BYG7 248 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 YIPF3Q9GZM5 350 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 DNTTIP1Q9H147 329 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 SLC25A19Q9HC21 320 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 PAPOLBQ9NRJ5 636 aaKnown RBP11.72□□□□□ -0.53
TPM1-223ENST00000560445 POMPQ9Y244 141 aa11.72□□□□□ -0.53
TPM1-223ENST00000560445 CAB39Q9Y376 341 aaPredicted RBP11.72□□□□□ -0.53
TPM1-223ENST00000560445 TMPRSS2O15393 492 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 NDUFB3O43676 98 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 FKBP6O75344 327 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 ZNF254O75437 659 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 ATP5HO75947 161 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 CST4P01036 141 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 LHBP01229 141 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 IGHV4-38-2P0DP08 117 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 DCTDP32321 178 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 RPL15P61313 204 aaKnown RBP11.71□□□□□ -0.53
TPM1-223ENST00000560445 CDK5Q00535 292 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 ZNF829Q3KNS6 432 aaPredicted RBP11.71□□□□□ -0.53
TPM1-223ENST00000560445 SFRP4Q6FHJ7 346 aaPredicted RBP11.71□□□□□ -0.53
TPM1-223ENST00000560445 LYPD2Q6UXB3 125 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 ZNF841Q6ZN19 808 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 GCSAMQ8N6F7 178 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 OR1M1Q8NGA1 313 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 MNTQ99583 582 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 PCGF1Q9BSM1 259 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 ZNF747Q9BV97 191 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 MED20Q9H944 212 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 DNAJB11Q9UBS4 358 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 POMT1Q9Y6A1 747 aa11.71□□□□□ -0.53
TPM1-223ENST00000560445 TCRBV3S1A0A5B6 114 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 DVL1O14640 695 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 GSC2O15499 205 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 PSKH1P11801 424 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 MAP2K3P46734 347 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 ESRRGP62508 458 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 HNRNPA0Q13151 305 aaKnown RBP11.7□□□□□ -0.54
TPM1-223ENST00000560445 SLC9A3R2Q15599 337 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 SNAPC1Q16533 368 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 LRRC10Q5BKY1 277 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 PRSS45Q7RTY3 260 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 COMMD2Q86X83 199 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 FAM90A1Q86YD7 464 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 CPOQ8IVL8 374 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 ZDHHC23Q8IYP9 409 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 SLC7A6OSQ96CW6 309 aaPredicted RBP11.7□□□□□ -0.54
TPM1-223ENST00000560445 MED30Q96HR3 178 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 WDFY2Q96P53 400 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 TLNRD1Q9H1K6 362 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 PRDM13Q9H4Q3 707 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 MOB1AQ9H8S9 216 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 BRD7Q9NPI1 651 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 H2AFY2Q9P0M6 372 aaPredicted RBP11.7□□□□□ -0.54
TPM1-223ENST00000560445 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.7□□□□□ -0.54
TPM1-223ENST00000560445 KPTNQ9Y664 436 aa11.7□□□□□ -0.54
TPM1-223ENST00000560445 TENM1Q9UKZ4 2725 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 A0A0U1RQV5 110 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 ZNF816-ZNF321PA0A0X1KG74 233 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 A0A1B0GVI7 797 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 SRRM5B3KS81 715 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 C22orf46C9J442 243 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 SPRY1O43609 319 aaPredicted RBP11.69□□□□□ -0.54
TPM1-223ENST00000560445 SELENOFO60613 162 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 MTRF1O75570 445 aaKnown RBP11.69□□□□□ -0.54
TPM1-223ENST00000560445 GYPAP02724 150 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 FCGR1AP12314 374 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 ALOX5APP20292 161 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 GUCA2AQ02747 115 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 BNIP1Q12981 228 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 PRDX4Q13162 271 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 ZBTB37Q5TC79 503 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 C16orf87Q6PH81 154 aa11.69□□□□□ -0.54
TPM1-223ENST00000560445 WDR82Q6UXN9 313 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms