RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 NPIPB9F8W1W9 429 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 AP4M1O00189 453 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ZNF593O00488 134 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 PLPP1O14494 284 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 PHOX2AO14813 284 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 SPRY2O43597 315 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 PLPP2O43688 288 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 SOX15O60248 233 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 SCO1O75880 301 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 CD160O95971 181 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 HBZP02008 142 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 MBPP02686 304 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 TFAP2AP05549 437 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 CT62P0C5K7 136 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 TAC1P20366 129 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 MAOAP21397 527 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ACRV1P26436 265 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 OR1E2P47887 323 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ZFP36L2P47974 494 aaKnown RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 GZMKP49863 264 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 DEFA1P59665 94 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 DEFA3P59666 94 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 NANOS3P60323 173 aaKnown RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 RPL27P61353 136 aaKnown RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 RPL31P62899 125 aaKnown RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ARG2P78540 354 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 CDK6Q00534 326 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ZNF154Q13106 437 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 MYBPHQ13203 477 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ZNF234Q14588 700 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 EBPQ15125 230 aaKnown RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 GABRA6Q16445 453 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ZNF181Q2M3W8 571 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 TRMT12Q53H54 448 aaKnown RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 CLEC12AQ5QGZ9 265 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 C1orf220Q5T0J3 134 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 C1orf194Q5T5A4 169 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 CPTPQ5TA50 214 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 EIF5AL1Q6IS14 154 aaKnown RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 SPSB3Q6PJ21 355 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 RNF165Q6ZSG1 346 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 Q6ZT83 130 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 SHFQ7M4L6 423 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ASCL5Q7RTU5 278 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 CMC1Q7Z7K0 106 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ZNF808Q8N4W9 903 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ZNF548Q8NEK5 533 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 DCAKDQ8WVC6 231 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 TMED6Q8WW62 240 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ATOH8Q96SQ7 321 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 CSF3RQ99062 836 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 NIPSNAP3BQ9BS92 247 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 MARVELD1Q9BSK0 173 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 PSMG3Q9BT73 122 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 DOHHQ9BU89 302 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 TAPBPLQ9BX59 468 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 RNF26Q9BY78 433 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 LINC00470Q9BZP3 86 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 NAA50Q9GZZ1 169 aaKnown RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 OR51J1Q9H342 316 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 ENY2Q9NPA8 101 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 SLC52A3Q9NQ40 469 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 IL36GQ9NZH8 169 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 COMMD9Q9P000 198 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 THAP10Q9P2Z0 257 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 FZR1Q9UM11 496 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 BTRCQ9Y297 605 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 TMEM131LA2VDJ0 1609 aa3.9□□□□□ -1.79
HMGB3P26-201ENST00000560051 TNS3Q68CZ2 1445 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 TRAV38-1A0A0B4J264 116 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 IGHV2-70DA0A0C4DH43 119 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 ATP6AP2A0A1C7CYW4 349 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 TCRBV7S3A2A0A539 114 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 CASTOR2A6NHX0 329 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 OR5H1A6NKK0 313 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 FAM159BA6NKW6 160 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 IFITM5A6NNB3 132 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 LMO7DNF2Z398 122 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 F5H5K5 113 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 J3QR89 54 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 TNFRSF11BO00300 401 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 HSPB6O14558 160 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 TNFRSF13BO14836 293 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 MFSD11O43934 449 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 OR7C2O60412 319 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 GCM2O75603 506 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 MMP23AO75900 390 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 SOX14O95416 240 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 RENP00797 406 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 HBE1P02100 147 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 IGF1P05019 195 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 ABOP16442 354 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 MGMTP16455 207 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 TNFRSF1BP20333 461 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 PSMB1P20618 241 aaKnown RBP3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 CASP1P29466 404 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 PYCR1P32322 319 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 HRH1P35367 487 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 RFX2P48378 723 aa3.89□□□□□ -1.79
HMGB3P26-201ENST00000560051 PDX1P52945 283 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms