RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ACBD4Q8NC06 268 aa2.55□□□□□ -2
SPG11-218ENST00000559754 OR4S2Q8NH73 311 aa2.55□□□□□ -2
SPG11-218ENST00000559754 OR6X1Q8NH79 312 aa2.55□□□□□ -2
SPG11-218ENST00000559754 SFXN5Q8TD22 340 aa2.55□□□□□ -2
SPG11-218ENST00000559754 RNASEH2CQ8TDP1 164 aaKnown RBP2.55□□□□□ -2
SPG11-218ENST00000559754 DNAJB3Q8WWF6 145 aa2.55□□□□□ -2
SPG11-218ENST00000559754 OR5P2Q8WZ92 322 aa2.55□□□□□ -2
SPG11-218ENST00000559754 CDS1Q92903 461 aa2.55□□□□□ -2
SPG11-218ENST00000559754 RNF185Q96GF1 192 aa2.55□□□□□ -2
SPG11-218ENST00000559754 VAT1Q99536 393 aa2.55□□□□□ -2
SPG11-218ENST00000559754 TEAD3Q99594 435 aa2.55□□□□□ -2
SPG11-218ENST00000559754 SULT4A1Q9BR01 284 aa2.55□□□□□ -2
SPG11-218ENST00000559754 ING2Q9H160 280 aa2.55□□□□□ -2
SPG11-218ENST00000559754 DSN1Q9H410 356 aa2.55□□□□□ -2
SPG11-218ENST00000559754 ZNF442Q9H7R0 627 aa2.55□□□□□ -2
SPG11-218ENST00000559754 IFT46Q9NQC8 304 aa2.55□□□□□ -2
SPG11-218ENST00000559754 RGS18Q9NS28 235 aa2.55□□□□□ -2
SPG11-218ENST00000559754 HMGXB4Q9UGU5 601 aa2.55□□□□□ -2
SPG11-218ENST00000559754 FBXL3Q9UKT7 428 aa2.55□□□□□ -2
SPG11-218ENST00000559754 SNX24Q9Y343 169 aa2.55□□□□□ -2
SPG11-218ENST00000559754 MRPS18BQ9Y676 258 aaKnown RBP2.55□□□□□ -2
SPG11-218ENST00000559754 WDR62O43379 1518 aa2.54□□□□□ -2
SPG11-218ENST00000559754 ELP1O95163 1332 aa2.54□□□□□ -2
SPG11-218ENST00000559754 SLC5A10A0PJK1 596 aa2.54□□□□□ -2
SPG11-218ENST00000559754 GOLGA8KD6RF30 607 aa2.54□□□□□ -2
SPG11-218ENST00000559754 LINC01619G3V211 115 aa2.54□□□□□ -2
SPG11-218ENST00000559754 GOLGA8MH3BSY2 632 aa2.54□□□□□ -2
SPG11-218ENST00000559754 H7C417 338 aa2.54□□□□□ -2
SPG11-218ENST00000559754 TNFRSF11BO00300 401 aa2.54□□□□□ -2
SPG11-218ENST00000559754 CDIPTO14735 213 aa2.54□□□□□ -2
SPG11-218ENST00000559754 SLC31A1O15431 190 aa2.54□□□□□ -2
SPG11-218ENST00000559754 FAM189A1O60320 539 aa2.54□□□□□ -2
SPG11-218ENST00000559754 SHOX2O60902 331 aaPredicted RBP2.54□□□□□ -2
SPG11-218ENST00000559754 SLC35G6P0C7Q6 338 aa2.54□□□□□ -2
SPG11-218ENST00000559754 OCM2P0CE71 109 aa2.54□□□□□ -2
SPG11-218ENST00000559754 PSKH1P11801 424 aa2.54□□□□□ -2
SPG11-218ENST00000559754 RPA3P35244 121 aaPredicted RBP2.54□□□□□ -2
SPG11-218ENST00000559754 RPS9P46781 194 aaKnown RBP2.54□□□□□ -2
SPG11-218ENST00000559754 GALR1P47211 349 aa2.54□□□□□ -2
SPG11-218ENST00000559754 OR3A4PP47883 348 aa2.54□□□□□ -2
SPG11-218ENST00000559754 DIO3P55073 304 aa2.54□□□□□ -2
SPG11-218ENST00000559754 OR12D2P58182 307 aa2.54□□□□□ -2
SPG11-218ENST00000559754 CD164Q04900 197 aa2.54□□□□□ -2
SPG11-218ENST00000559754 PRKCDQ05655 676 aa2.54□□□□□ -2
SPG11-218ENST00000559754 FADDQ13158 208 aa2.54□□□□□ -2
SPG11-218ENST00000559754 RAB31Q13636 194 aa2.54□□□□□ -2
SPG11-218ENST00000559754 GNA13Q14344 377 aa2.54□□□□□ -2
SPG11-218ENST00000559754 ZNF266Q14584 549 aa2.54□□□□□ -2
SPG11-218ENST00000559754 KIR2DS1Q14954 304 aa2.54□□□□□ -2
SPG11-218ENST00000559754 PON3Q15166 354 aa2.54□□□□□ -2
SPG11-218ENST00000559754 NSDHLQ15738 373 aa2.54□□□□□ -2
SPG11-218ENST00000559754 TOMM34Q15785 309 aaPredicted RBP2.54□□□□□ -2
SPG11-218ENST00000559754 BCL2A1Q16548 175 aa2.54□□□□□ -2
SPG11-218ENST00000559754 SLC36A2Q495M3 483 aa2.54□□□□□ -2
SPG11-218ENST00000559754 HBMQ6B0K9 141 aa2.54□□□□□ -2
SPG11-218ENST00000559754 THOC7Q6I9Y2 204 aaKnown RBP2.54□□□□□ -2
SPG11-218ENST00000559754 LINC00173Q6ZV60 143 aa2.54□□□□□ -2
SPG11-218ENST00000559754 PAGE2Q7Z2X7 111 aa2.54□□□□□ -2
SPG11-218ENST00000559754 SLC30A8Q8IWU4 369 aa2.54□□□□□ -2
SPG11-218ENST00000559754 SPICQ8N5J4 248 aa2.54□□□□□ -2
SPG11-218ENST00000559754 FAM71E2Q8N5Q1 922 aa2.54□□□□□ -2
SPG11-218ENST00000559754 C11orf72Q8NBR9 251 aa2.54□□□□□ -2
SPG11-218ENST00000559754 LFNGQ8NES3 379 aa2.54□□□□□ -2
SPG11-218ENST00000559754 ATP6V1C2Q8NEY4 427 aa2.54□□□□□ -2
SPG11-218ENST00000559754 OR10AD1Q8NGE0 317 aa2.54□□□□□ -2
SPG11-218ENST00000559754 ANKRD7Q92527 254 aa2.54□□□□□ -2
SPG11-218ENST00000559754 RGP1Q92546 391 aaPredicted RBP2.54□□□□□ -2
SPG11-218ENST00000559754 CPNE4Q96A23 557 aaPredicted RBP2.54□□□□□ -2
SPG11-218ENST00000559754 CREB3L1Q96BA8 519 aa2.54□□□□□ -2
SPG11-218ENST00000559754 WDR34Q96EX3 536 aa2.54□□□□□ -2
SPG11-218ENST00000559754 CHMP6Q96FZ7 201 aa2.54□□□□□ -2
SPG11-218ENST00000559754 RDH12Q96NR8 316 aa2.54□□□□□ -2
SPG11-218ENST00000559754 CCDC94Q9BW85 323 aaPredicted RBP2.54□□□□□ -2
SPG11-218ENST00000559754 COA1Q9GZY4 146 aa2.54□□□□□ -2
SPG11-218ENST00000559754 ARV1Q9H2C2 271 aa2.54□□□□□ -2
SPG11-218ENST00000559754 MED4Q9NPJ6 270 aa2.54□□□□□ -2
SPG11-218ENST00000559754 MTFP1Q9UDX5 166 aa2.54□□□□□ -2
SPG11-218ENST00000559754 RAB23Q9ULC3 237 aa2.54□□□□□ -2
SPG11-218ENST00000559754 TFR2Q9UP52 801 aa2.54□□□□□ -2
SPG11-218ENST00000559754 WIF1Q9Y5W5 379 aa2.54□□□□□ -2
SPG11-218ENST00000559754 UBIAD1Q9Y5Z9 338 aa2.54□□□□□ -2
SPG11-218ENST00000559754 TRAV8-4A0A0B4J246 113 aa2.53□□□□□ -2
SPG11-218ENST00000559754 A0A0J9YXY3 114 aa2.53□□□□□ -2
SPG11-218ENST00000559754 FAM240AA0A1B0GVK7 77 aa2.53□□□□□ -2
SPG11-218ENST00000559754 A0A1W2PRG6 482 aa2.53□□□□□ -2
SPG11-218ENST00000559754 TMEM210A6NLX4 147 aa2.53□□□□□ -2
SPG11-218ENST00000559754 KMOO15229 486 aa2.53□□□□□ -2
SPG11-218ENST00000559754 CYTH3O43739 400 aa2.53□□□□□ -2
SPG11-218ENST00000559754 RDH16O75452 317 aa2.53□□□□□ -2
SPG11-218ENST00000559754 ADAP1O75689 374 aa2.53□□□□□ -2
SPG11-218ENST00000559754 SNAP29O95721 258 aa2.53□□□□□ -2
SPG11-218ENST00000559754 P01737 135 aa2.53□□□□□ -2
SPG11-218ENST00000559754 ORM1P02763 201 aa2.53□□□□□ -2
SPG11-218ENST00000559754 SERPINA6P08185 405 aa2.53□□□□□ -2
SPG11-218ENST00000559754 GNAO1P09471 354 aa2.53□□□□□ -2
SPG11-218ENST00000559754 ZDHHC11BP0C7U3 371 aa2.53□□□□□ -2
SPG11-218ENST00000559754 HSPD1P10809 573 aaKnown RBP2.53□□□□□ -2
SPG11-218ENST00000559754 ZNF35P13682 527 aa2.53□□□□□ -2
SPG11-218ENST00000559754 RCC1P18754 421 aaPredicted RBP2.53□□□□□ -2
SPG11-218ENST00000559754 RAB3AP20336 220 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms