RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ZNF701Q9NV72 531 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 NDUFB11Q9NX14 153 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 TAAR3PQ9P1P4 343 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 DUSP13Q9UII6 198 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 N6AMT1Q9Y5N5 214 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 TRBV5-7A0A0A0MS05 114 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 ZNF816-ZNF321PA0A0X1KG74 233 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 A0A1B0GVI7 797 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 C17orf100A8MU93 164 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 LMX1BO60663 402 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 ALX3O95076 343 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 TGFBR2P37173 567 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 ALDH3B2P48448 385 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 RIPPLY1Q0D2K3 151 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 ARMCX4Q5H9R4 360 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 LIPKQ5VXJ0 399 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 UTS2BQ765I0 119 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 MS4A15Q8N5U1 240 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 SEMA6DQ8NFY4 1073 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 GPR148Q8TDV2 347 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 GTF3AQ92664 365 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 UFD1Q92890 307 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 ITPKCQ96DU7 683 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 FAM71F1Q96KD3 344 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 FGF23Q9GZV9 251 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 SLC22A4Q9H015 551 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 COMMD4Q9H0A8 199 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 GTF2A1LQ9UNN4 478 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 RHBDD3Q9Y3P4 386 aa12.6□□□□□ -0.39
SNRPA1-207ENST00000559309 SPG11Q96JI7 2443 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 M0R233 179 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 GMDSO60547 372 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 GALP22466 123 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 GABRA5P31644 462 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 ALDH3B1P43353 468 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 RIPPLY3P57055 190 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 SELENOVP59797 346 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 SLC3A1Q07837 685 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 ODF4Q2M2E3 257 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 GFOD2Q3B7J2 385 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 Q499Y3 187 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 FAM76BQ5HYJ3 339 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 CRIP3Q6Q6R5 217 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 TMEM91Q6ZNR0 172 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 OR13C5Q8NGS8 318 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 ADAT3Q96EY9 351 aaPredicted RBP12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 DIRC2Q96SL1 478 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 MRPS26Q9BYN8 205 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 CHST5Q9GZS9 411 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 MS4A5Q9H3V2 200 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 PPP1R3EQ9H7J1 279 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 ZDHHC8Q9ULC8 765 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 LAMP3Q9UQV4 416 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 MPC1Q9Y5U8 109 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 VPS13CQ709C8 3753 aa12.59□□□□□ -0.39
SNRPA1-207ENST00000559309 TANC2Q9HCD6 1990 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 GGT3PA6NGU5 568 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 CCRL2O00421 344 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 PIN1P1O15428 100 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 TIMM8AO60220 97 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 IGHV1-46P01743 117 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 CD37P11049 281 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 FAHP16930 419 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 IGFBP3P17936 291 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 PSMA1P25786 263 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 CD200P41217 278 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 MAGEB1P43366 347 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 SNRPD2P62316 118 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 TRAM1Q15629 374 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 TSTQ16762 297 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 FAM209AQ5JX71 171 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 OR5AS1Q8N127 324 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 CELF2-AS1Q8N7Q2 184 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 OR13G1Q8NGZ3 307 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 HPSE2Q8WWQ2 592 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 PP6455Q8WZ26 134 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 NRGNQ92686 78 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 MBD6Q96DN6 1003 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 LURAP1Q96LR2 239 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 DERL3Q96Q80 235 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 MSL2Q9HCI7 577 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 GPR160Q9UJ42 338 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 ENPP5Q9UJA9 477 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 PIGLQ9Y2B2 252 aa12.58□□□□□ -0.4
SNRPA1-207ENST00000559309 AKAP6Q13023 2319 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 IGKV1-9A0A0C4DH69 117 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 H0YL77 283 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 RAF1P04049 648 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 NAT2P11245 290 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 FSTP19883 344 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 CRYBB2P43320 205 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 GATA4P43694 442 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 ZNF81P51508 661 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 RPS25P62851 125 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 MAB21L1Q13394 359 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 UBE2V2Q15819 145 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 NEDD8Q15843 81 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 ZMAT1Q5H9K5 638 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 CLVS2Q5SYC1 327 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 LYPD6Q86Y78 171 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms