RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 MMP25Q9NPA2 562 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 UQCC1Q9NVA1 299 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 SLC2A8Q9NY64 477 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 PIGLQ9Y2B2 252 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 GOLT1BQ9Y3E0 138 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 FAM221AA4D161 298 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 BLACEA4D250 179 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 PRAMEF26H0Y7S4 382 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 HRKO00198 91 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 TAAR5O14804 337 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 ZIC2O95409 532 aaPredicted RBP6.39□□□□□ -1.39
USP3-210ENST00000559192 RECKO95980 971 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 H2AFB1P0C5Y9 115 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 SCGB1C2P0DMR2 95 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 CSNK1A1P48729 337 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 FMODQ06828 376 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 RAB32Q13637 225 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 Q1RN00 199 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 LHX8Q68G74 356 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 NPSR1Q6W5P4 371 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 SECTM1Q8WVN6 248 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 TOE1Q96GM8 510 aaKnown RBP6.39□□□□□ -1.39
USP3-210ENST00000559192 COX14Q96I36 57 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 METTL9Q9H1A3 318 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 CES1P1Q9UKY3 287 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 YTHDF2Q9Y5A9 579 aaKnown RBP6.39□□□□□ -1.39
USP3-210ENST00000559192 PAPPA2Q9BXP8 1791 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 C17orf112F2Z3M2 114 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 DUX1O43812 170 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 ACTL6BO94805 426 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 THY1P04216 161 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 GLRA1P23415 457 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 PEBP1P30086 187 aaKnown RBP6.39□□□□□ -1.39
USP3-210ENST00000559192 F2RL1P55085 397 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 IL10RAQ13651 578 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 FAM53BQ14153 422 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 ELAVL1Q15717 326 aaKnown RBP6.39□□□□□ -1.39
USP3-210ENST00000559192 MESTQ5EB52 335 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 NCMAPQ5T1S8 102 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 PRR27Q6MZM9 219 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 MOB3CQ70IA8 216 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 CDC20BQ86Y33 519 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 OR51A2Q8NGJ7 313 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 OR13D1Q8NGV5 346 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 RLN3Q8WXF3 142 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 MARVELD3Q96A59 401 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 SLC46A1Q96NT5 459 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 GPR173Q9NS66 373 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 LAMP3Q9UQV4 416 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 RNF24Q9Y225 148 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 SLC17A4Q9Y2C5 497 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 A0A1W2PPQ1 181 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 METTL12A8MUP2 240 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 HSD17B6O14756 317 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 JTBO76095 146 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 MT-ATP6P00846 226 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 ABOP16442 354 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 CD1CP29017 333 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 CHRNB4P30926 498 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 ENDOGQ14249 297 aaKnown RBP6.39□□□□□ -1.39
USP3-210ENST00000559192 NR0B2Q15466 257 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 SHEQ5VZ18 495 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 FAM24BQ8N5W8 94 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 TMEM104Q8NE00 496 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 OR14L1PQ8NHC6 308 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 APOBEC4Q8WW27 367 aaKnown RBP6.39□□□□□ -1.39
USP3-210ENST00000559192 SMIM12Q96EX1 92 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 ASB16Q96NS5 453 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 OR51I2Q9H344 312 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 MED9Q9NWA0 146 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 PADI1Q9ULC6 663 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 VSIG4Q9Y279 399 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 CXorf51AA0A1B0GTR3 108 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 FAM221BA6H8Z2 402 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 ZNF727A8MUV8 499 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 BMPR1BO00238 502 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 PTP4A3O75365 173 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 NKX2-2O95096 273 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 HPP00738 406 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 SLC25A1P53007 311 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 PPP1CAP62136 330 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 OR5I1Q13606 314 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 ATRAIDQ6UW56 229 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 PET117Q6UWS5 81 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 TMEM123Q8N131 208 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 ZNRF4Q8WWF5 429 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 PIGCQ92535 297 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 TMPRSS13Q9BYE2 586 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 CNTD2Q9H8S5 307 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 SLC2A4RGQ9NR83 387 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 RASL12Q9NYN1 266 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 GDE1Q9NZC3 331 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 AK3Q9UIJ7 227 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 PRRC2BQ5JSZ5 2229 aaKnown RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 RLFQ13129 1914 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 ABCD4O14678 606 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 TERTO14746 1132 aaKnown RBP6.38□□□□□ -1.39
USP3-210ENST00000559192 ZNF749O43361 778 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 CDAP32320 146 aa6.38□□□□□ -1.39
USP3-210ENST00000559192 RFC3P40938 356 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms