RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 OR13G1Q8NGZ3 307 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 GPBAR1Q8TDU6 330 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 LPAR5Q9H1C0 372 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 GPR84Q9NQS5 396 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 RAB22AQ9UL26 194 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 MS4A18H0YCH9 400 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 FGF16O43320 207 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 TNFSF12O43508 249 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 NDUFS6O75380 124 aaKnown RBP10.91□□□□□ -0.66
LDLR-205ENST00000557933 GABRR1P24046 479 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 RRADP55042 308 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 SLC26A5P58743 744 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 FABP9Q0Z7S8 132 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 SMCO1Q147U7 214 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 MS4A18Q3C1V0 323 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 EMC4Q5J8M3 183 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 DHRS7BQ6IAN0 325 aaPredicted RBP10.91□□□□□ -0.66
LDLR-205ENST00000557933 FAM57BQ71RH2 274 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 ZNF440Q8IYI8 595 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 ZNF248Q8NDW4 579 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 CD300LFQ8TDQ1 290 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 ASB17Q8WXJ9 295 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 PIGTQ969N2 578 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 ADIPOR1Q96A54 375 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 RAB33BQ9H082 229 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 LANCL2Q9NS86 450 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 FBXO7Q9Y3I1 522 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 ESPL1Q14674 2120 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 A0A1W2PPE2 198 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 RAB19A4D1S5 217 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 COLCA2A8K830 154 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 C2CD4DB7Z1M9 353 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 PHYHO14832 338 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 IL2RAP01589 272 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 JMJD7P0C870 316 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 CD79AP11912 226 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 PGCP20142 388 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 HSD11B1P28845 292 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 OPRM1P35372 400 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 MRPS21P82921 87 aaKnown RBP10.91□□□□□ -0.66
LDLR-205ENST00000557933 IAH1Q2TAA2 248 aaPredicted RBP10.91□□□□□ -0.66
LDLR-205ENST00000557933 LPCAT3Q6P1A2 487 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 KLHL24Q6TFL4 600 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 ZNF721Q8TF20 911 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 ERGIC1Q969X5 290 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 BCL2L14Q9BZR8 327 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 GHRLQ9UBU3 117 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 KLF2Q9Y5W3 355 aaPredicted RBP10.91□□□□□ -0.66
LDLR-205ENST00000557933 FLVCR1Q9Y5Y0 555 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 GIMD1P0DJR0 217 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 OR13C7P0DN81 318 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 ZNF44P15621 663 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 SLC6A9P48067 706 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 SNU13P55769 128 aaKnown RBP10.91□□□□□ -0.66
LDLR-205ENST00000557933 HSD17B7P56937 341 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 FXYD4P59646 89 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 SPEM2Q0P670 501 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 TMEM128Q5BJH2 165 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 PDZD11Q5EBL8 140 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 HSD17B11Q8NBQ5 300 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 OR5H2Q8NGV7 314 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 PHYHIPLQ96FC7 376 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 EIF5A2Q9GZV4 153 aaKnown RBP10.91□□□□□ -0.66
LDLR-205ENST00000557933 ZNF304Q9HCX3 659 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 MMP26Q9NRE1 261 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 FAM86C1Q9NVL1 165 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 SLC2A8Q9NY64 477 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 FBXL17Q9UF56 701 aa10.91□□□□□ -0.66
LDLR-205ENST00000557933 TTLL8A6PVC2 850 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 F5H5K5 113 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 SRSF10O75494 262 aaKnown RBP10.9□□□□□ -0.66
LDLR-205ENST00000557933 APOC1P02654 83 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 ZNF14P17017 642 aaPredicted RBP10.9□□□□□ -0.66
LDLR-205ENST00000557933 CDPF1Q6NVV7 123 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 C6orf201Q7Z4U5 140 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 HOGA1Q86XE5 327 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 SLC22A24Q8N4F4 322 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 SLC30A7Q8NEW0 376 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 OR51T1Q8NGJ9 327 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 RTBDNQ9BSG5 229 aaPredicted RBP10.9□□□□□ -0.66
LDLR-205ENST00000557933 TMEM59Q9BXS4 323 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 SH3BGRL3Q9H299 93 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 CUTCQ9NTM9 273 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 FER1L5A0AVI2 2057 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 A8MVM7 634 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 ZNF814B7Z6K7 855 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 ANGPTL7O43827 346 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 FABP1P07148 127 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 P2RY4P51582 365 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 ACY1Q03154 408 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 EIF2S3LQ2VIR3 472 aaKnown RBP10.9□□□□□ -0.66
LDLR-205ENST00000557933 AWAT1Q58HT5 328 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 AKR7LQ8NHP1 331 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 LIPHQ8WWY8 451 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 EDAQ92838 391 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 SLC17A5Q9NRA2 495 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 FAM206AQ9NX38 181 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 URGCP-MRPS24S4R325 110 aa10.9□□□□□ -0.66
LDLR-205ENST00000557933 SPTY2D1-AS1A0A0U1RR47 76 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms