RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 OR51F2Q8NH61 342 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 RNFT2Q96EX2 444 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 LYZL4Q96KX0 146 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 PAPOLGQ9BWT3 736 aaKnown RBP10.52□□□□□ -0.73
SLIRP-211ENST00000557623 DCAF16Q9NXF7 216 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 MRM2Q9UI43 246 aaKnown RBP10.52□□□□□ -0.73
SLIRP-211ENST00000557623 CDC42EP3Q9UKI2 254 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 PCDHB10Q9UN67 800 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 MPC1Q9Y5U8 109 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 SNX5Q9Y5X3 404 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 ABCA2Q9BZC7 2435 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 METTL15A6NJ78 407 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 FAM157AC9JC47 383 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 SRSF10O75494 262 aaKnown RBP10.51□□□□□ -0.73
SLIRP-211ENST00000557623 MTRF1O75570 445 aaKnown RBP10.51□□□□□ -0.73
SLIRP-211ENST00000557623 APOL3O95236 402 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 CYB5R3P00387 301 aaPredicted RBP10.51□□□□□ -0.73
SLIRP-211ENST00000557623 CST4P01036 141 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 MSMBP08118 114 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 GABRB1P18505 474 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 HNF1AP20823 631 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 CPT2P23786 658 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 IL5RAQ01344 420 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 LRRC36Q1X8D7 754 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 CHRFAM7AQ494W8 412 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 BCL2L15Q5TBC7 163 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 ZBTB37Q5TC79 503 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 PRAMEF6Q5VXH4 476 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 TTC23Q5W5X9 447 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 SSX6Q7RTT6 188 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 FAM220AQ7Z4H9 259 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 ENTHD1Q8IYW4 607 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 SVOPQ8N4V2 548 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 RHOXF1Q8NHV9 184 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 MRPL48Q96GC5 212 aaKnown RBP10.51□□□□□ -0.73
SLIRP-211ENST00000557623 MICU1Q9BPX6 476 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 SHARPINQ9H0F6 387 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 DCLRE1BQ9H816 532 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 UFSP2Q9NUQ7 469 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 UBAP1Q9NZ09 502 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 OR52A1Q9UKL2 312 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 GTF2A1LQ9UNN4 478 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 DOCK11Q5JSL3 2073 aa10.51□□□□□ -0.73
SLIRP-211ENST00000557623 PPIAL4EA0A075B759 164 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 TRAV20A0A0B4J274 112 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 IGHV3-64DA0A0J9YX35 117 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 ZNF816-ZNF321PA0A0X1KG74 233 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 DAPL1A0PJW8 107 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 PPIAL4DF5H284 164 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 MAGEB4O15481 346 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-211ENST00000557623 FAM20BO75063 409 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 RPP14O95059 124 aaKnown RBP10.5□□□□□ -0.73
SLIRP-211ENST00000557623 PNPP00491 289 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 IGLV3-1P01715 115 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 TTRP02766 147 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 GRPP07492 148 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 PPIAL4FP0DN26 164 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 ACKR3P25106 362 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 PEX2P28328 305 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 PMELP40967 661 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 MFGE8Q08431 387 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-211ENST00000557623 RIPPLY1Q0D2K3 151 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 ZMYND11Q15326 602 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 MPPED2Q15777 294 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 LIPNQ5VXI9 398 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 LPCAT4Q643R3 524 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 KCTD20Q7Z5Y7 419 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 THAP5Q7Z6K1 395 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 ELMOD2Q8IZ81 293 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 SEMA6DQ8NFY4 1073 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 OR51E1Q8TCB6 317 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 PIGCQ92535 297 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 DVL3Q92997 716 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-211ENST00000557623 TMEM186Q96B77 213 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 HIST1H2AAQ96QV6 131 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 RTL8AQ9BWD3 113 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 BEX2Q9BXY8 128 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 VCXQ9H320 206 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 PATZ1Q9HBE1 687 aaKnown RBP10.5□□□□□ -0.73
SLIRP-211ENST00000557623 TRIM36Q9NQ86 728 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 G6PC2Q9NQR9 355 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 GPR84Q9NQS5 396 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 RNF7Q9UBF6 113 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 EXOGQ9Y2C4 368 aaKnown RBP10.5□□□□□ -0.73
SLIRP-211ENST00000557623 RHBDD3Q9Y3P4 386 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 RPL36Q9Y3U8 105 aaKnown RBP10.5□□□□□ -0.73
SLIRP-211ENST00000557623 PPIAL4AQ9Y536 164 aa10.5□□□□□ -0.73
SLIRP-211ENST00000557623 ZANQ9Y493 2812 aa10.49□□□□□ -0.73
SLIRP-211ENST00000557623 ERICH4A6NGS2 130 aa10.49□□□□□ -0.73
SLIRP-211ENST00000557623 A6NLC8 198 aa10.49□□□□□ -0.73
SLIRP-211ENST00000557623 TMEM210A6NLX4 147 aa10.49□□□□□ -0.73
SLIRP-211ENST00000557623 ZNF850A8MQ14 1090 aa10.49□□□□□ -0.73
SLIRP-211ENST00000557623 J3QRE1 110 aa10.49□□□□□ -0.73
SLIRP-211ENST00000557623 DLGAP1O14490 977 aa10.49□□□□□ -0.73
SLIRP-211ENST00000557623 CASQ2O14958 399 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-211ENST00000557623 FOXH1O75593 365 aa10.49□□□□□ -0.73
SLIRP-211ENST00000557623 DHRS3O75911 302 aa10.49□□□□□ -0.73
SLIRP-211ENST00000557623 DBTP11182 482 aaKnown RBP10.49□□□□□ -0.73
SLIRP-211ENST00000557623 ZNF85Q03923 595 aa10.49□□□□□ -0.73
SLIRP-211ENST00000557623 ZNF91Q05481 1191 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms