RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 RP2O75695 350 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 MMP23AO75900 390 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 H6PDO95479 791 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 IFNA1P01562 189 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 C8GP07360 202 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 TACSTD2P09758 323 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF43P17038 809 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 IL1RNP18510 177 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PGAM1P18669 254 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 BGNP21810 368 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 DDTP30046 118 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 CALCRP30988 508 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 VHLP40337 213 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 RFC3P40938 356 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 NPBWR2P48146 333 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PRLHRP49683 370 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 CSRP3P50461 194 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 LMO4P61968 165 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 GNGT1P63211 74 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 TNNC1P63316 161 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PITPNAQ00169 270 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ARL6IP1Q15041 203 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 RAB35Q15286 201 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ANGPT1Q15389 498 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF239Q16600 458 aaKnown RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 TATDN3Q17R31 274 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF630Q2M218 657 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PLPPR5Q32ZL2 321 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 C6orf226Q5I0X4 101 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ATAD3CQ5T2N8 411 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 RSBN1Q5VWQ0 802 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PVRIGQ6DKI7 326 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 FAM19A1Q7Z5A9 133 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 S100A7AQ86SG5 101 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 LINC01551Q86U37 167 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF676Q8N7Q3 588 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF485Q8NCK3 441 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 SYNPRQ8TBG9 265 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 YIPF6Q96EC8 236 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 OR52B2Q96RD2 323 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 SLC35A5Q9BS91 424 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 SNHG12Q9BXW3 62 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ROPN1BQ9BZX4 212 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PLEKHJ1Q9NW61 149 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 DPM3Q9P2X0 92 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ARL2BPQ9Y2Y0 163 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 MTCH2Q9Y6C9 303 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 NESP48681 1621 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 MADDQ8WXG6 1647 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 NKTRP30414 1462 aaKnown RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PLEKHH2Q8IVE3 1493 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 TEX14Q8IWB6 1497 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 RIC1Q4ADV7 1423 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 NSD3Q9BZ95 1437 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ARHGEF28Q8N1W1 1705 aaKnown RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 CHD4Q14839 1912 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 MYH4Q9Y623 1939 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 IGHV3-35A0A0C4DH35 117 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 A0A1B0GVI7 797 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 B4DXG7 233 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ANKRD63C9JTQ0 380 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 G3V2T6 193 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 KPNA3O00505 521 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 AZIN1O14977 448 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PPP1R2P9O14990 202 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 C6orf47O95873 294 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PTTG1O95997 202 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 APODP05090 189 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 OR9G9P0C7N8 305 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 GFAPP14136 432 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 UQCRBP14927 111 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PVRP15151 417 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 KITLGP21583 273 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PRDX2P32119 198 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 KDELR2P33947 212 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 RPL35P42766 123 aaKnown RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 KPNA2P52292 529 aaKnown RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 MLF1P58340 268 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 MRPS22P82650 360 aaKnown RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 FAM3AP98173 230 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 EMX1Q04741 257 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 RGS1Q08116 209 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 FGL1Q08830 312 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ABRAXAS2Q15018 415 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 SMIM21Q3B7S5 101 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 CCSMST1Q4G0I0 132 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 AKIRIN2Q53H80 203 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PRR30Q53SZ7 412 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PYY3Q5JQD4 70 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 CLLU1Q5K131 121 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 SEL1L2Q5TEA6 688 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 RAET1LQ5VY80 246 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PRR5LQ6MZQ0 368 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 PNCKQ6P2M8 343 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF620Q6ZNG0 422 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 RNF165Q6ZSG1 346 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 LINC00336Q6ZUF6 198 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 Q71RC1 249 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ABHD13Q7L211 337 aa1.3□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF683Q8IZ20 524 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms