RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 PTTG3PQ9NZH4 202 aa13.54□□□□□ -0.24
TMEM55B-207ENST00000557041 DIDO1Q9BTC0 2240 aaKnown RBP13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 A0A1B0GW55 424 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 HSPB2A8KAH6 182 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 DUX4L2P0CJ85 424 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 DUX4L3P0CJ86 424 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 DUX4L4P0CJ87 422 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 DUX4L5P0CJ88 424 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 DUX4L6P0CJ89 424 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 DUX4L7P0CJ90 424 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 SERPINF1P36955 418 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 UNC119Q13432 240 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 HSPB2Q16082 182 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 MOB3CQ70IA8 216 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 C1QL2Q7Z5L3 287 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 OR9K2Q8NGE7 335 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 DYRK2Q92630 601 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 MBD2Q9UBB5 411 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 DUX4Q9UBX2 424 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 VSIG4Q9Y279 399 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 TOX3O15405 576 aaPredicted RBP13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 FARS2O95363 451 aaKnown RBP13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 RLN2P04090 185 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 IL5P05113 134 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 RRADP55042 308 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 IL11RAQ14626 422 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 PCOLCEQ15113 449 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 DOK3Q7L591 496 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 C1orf210Q8IVY1 113 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 OR2Y1Q8NGV0 311 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 C12orf49Q9H741 205 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 ASF1BQ9NVP2 202 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 P4HTMQ9NXG6 502 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 PIPOXQ9P0Z9 390 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 C14orf166Q9Y224 244 aaKnown RBP13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 DOCK10Q96BY6 2186 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 PIEZO2Q9H5I5 2752 aa13.53□□□□□ -0.24
TMEM55B-207ENST00000557041 EIF1BO60739 113 aaKnown RBP13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 GLRA1P23415 457 aa13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 DUSP1P28562 367 aa13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 RBMXP38159 391 aaKnown RBP13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 CLDN15P56746 228 aa13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 DEGS2Q6QHC5 323 aa13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 TMEM229BQ8NBD8 167 aa13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 OR56B1Q8NGI3 324 aa13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 OR6X1Q8NH79 312 aa13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 CPNE2Q96FN4 548 aaPredicted RBP13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 STRADBQ9C0K7 418 aa13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 SLC6A15Q9H2J7 730 aa13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 SDHAF2Q9NX18 166 aa13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 CHCHD2Q9Y6H1 151 aaPredicted RBP13.52□□□□□ -0.24
TMEM55B-207ENST00000557041 RFPL3SP0C7P2 107 aa13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 PXDC1Q5TGL8 231 aa13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 PLCXD3Q63HM9 321 aa13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 DHRS13Q6UX07 377 aa13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 TMEM185AQ8NFB2 350 aa13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 RBPMSQ93062 196 aaKnown RBP13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 PPA2Q9H2U2 334 aa13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 LSM5Q9Y4Y9 91 aaKnown RBP13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 RBM7Q9Y580 266 aaKnown RBP13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 PCNX2A6NKB5 2137 aa13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 MRPL33O75394 65 aaKnown RBP13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 PHLDA2Q53GA4 152 aa13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 PHYHD1Q5SRE7 291 aa13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 PARPBPQ9NWS1 579 aa13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 SPTAN1Q13813 2472 aaKnown RBP13.52□□□□□ -0.25
TMEM55B-207ENST00000557041 CADP27708 2225 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 CCDC187A0A096LP49 1063 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 FBXO24O75426 580 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 CBR3O75828 277 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 ZNF32P17041 273 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 DSCR4P56555 118 aaPredicted RBP13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 AIMP2Q13155 320 aaKnown RBP13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 ACER2Q5QJU3 275 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 CLVS2Q5SYC1 327 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 UBALD2Q8IYN6 164 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 PRR18Q8N4B5 295 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 PAQR8Q8TEZ7 354 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 SCPEP1Q9HB40 452 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 NPDC1Q9NQX5 325 aaPredicted RBP13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 AQP7P3A6NL99 342 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 ANOS1P23352 680 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 IL32P24001 234 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 CASRP41180 1078 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 SP6Q3SY56 376 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 MFRPQ9BY79 579 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 HES7Q9BYE0 225 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 NELFAQ9H3P2 528 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 CDC14BO60729 498 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 UMODP07911 640 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 PTGFRP43088 359 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 GRB2P62993 217 aaKnown RBP13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 ZP4Q12836 540 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 MEX3BQ6ZN04 569 aaKnown RBP13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 PGAP1Q75T13 922 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 PAPOLGQ9BWT3 736 aaKnown RBP13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 MS4A7Q9GZW8 240 aaPredicted RBP13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 SLCO5A1Q9H2Y9 848 aa13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 NOSIPQ9Y314 301 aaKnown RBP13.51□□□□□ -0.25
TMEM55B-207ENST00000557041 KIAA2026Q5HYC2 2103 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms