RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 MRPS18BQ9Y676 258 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 PTPN13Q12923 2485 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 HECTD1Q9ULT8 2610 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 AKAP13Q12802 2813 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 IGKV3D-15A0A087WSY6 115 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 IGKV1D-43A0A0B4J1Z2 117 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 A0A0G2JMM0 328 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 A0A0G2JMP0 313 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 A0A0X1KG70 313 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 A0A1B0GTH9 108 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 A0A1B0GVI7 797 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 LINC00854A0A1B0GVQ3 168 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 A0A1W2PPB8 328 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 A0A1W2PRS3 328 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 PINLYPA6NC86 204 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ARGFXA6NJG6 315 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 A6NL46 340 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ZNF716A6NP11 495 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 CYSRT1A8MQ03 144 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ZNF724A8MTY0 619 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 KIR3DP1A8MWS1 328 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ZNF878C9JN71 531 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 PLA2G10O15496 165 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 NKX2-8O15522 239 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 SYT7O43581 403 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 CYTIPO60759 359 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 RAMP1O60894 148 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 MRPL33O75394 65 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 KRT33AO76009 404 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 GLSO94925 669 aaPredicted RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 ECDO95905 644 aaPredicted RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 PAHP00439 452 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 MAS1P04201 325 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 EIF4EP06730 217 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 CST2P09228 141 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 CPN1P15169 458 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 NDUFB7P17568 137 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 AZGP1P25311 298 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 CDAP32320 146 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 MNDAP41218 407 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 RFX2P48378 723 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 AP3S2P59780 193 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 HIST1H3AP68431 136 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ARG2P78540 354 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 RNPS1Q15287 305 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 FAM189A2Q15884 450 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 RAB11BQ15907 218 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ODF4Q2M2E3 257 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 C2orf76Q3KRA6 126 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 HES5Q5TA89 166 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 HIST2H3PS2Q5TEC6 136 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ZNF57Q68EA5 555 aaPredicted RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 CORO6Q6QEF8 472 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 PLET1Q6UQ28 207 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 HIST2H3AQ71DI3 136 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 PGAP1Q75T13 922 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 FCRLAQ7L513 359 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 NRARPQ7Z6K4 114 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 LINC00346Q8IVM7 164 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 WDFY1Q8IWB7 410 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 UBQLNLQ8IYU4 475 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 NKAIN3Q8N8D7 197 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ZFP62Q8NB50 900 aaPredicted RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 TMEM178AQ8NBL3 297 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 MDS2Q8NDY4 140 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 DUSP18Q8NEJ0 188 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 OR4M2Q8NGB6 313 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 OR13C3Q8NGS6 347 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 OR5H6Q8NGV6 325 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ENKURQ8TC29 256 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 CHAC2Q8WUX2 184 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 SNRNP27Q8WVK2 155 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 ASB5Q8WWX0 329 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ROBO4Q8WZ75 1007 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ITFG2Q969R8 447 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 SPTSSAQ969W0 71 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 PTX4Q96A99 478 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 RFT1Q96AA3 541 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 TMEM45BQ96B21 275 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 FAM3DQ96BQ1 224 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 FGGYQ96C11 551 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ZC3HAV1LQ96H79 300 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 ADGRG7Q96K78 797 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ZNF385AQ96PM9 386 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 SIGLEC12Q96PQ1 595 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ABHD1Q96SE0 405 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 NEURL2Q9BR09 285 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 C7orf50Q9BRJ6 194 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 SRXN1Q9BYN0 137 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 TTTY12Q9BZ98 90 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 PRRG4Q9BZD6 226 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ULBP2Q9BZM5 246 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 RNF122Q9H9V4 155 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 TMEM138Q9NPI0 162 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 ASCL3Q9NQ33 180 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 G6PC2Q9NQR9 355 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 SERTAD4Q9NUC0 356 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 DDX28Q9NUL7 540 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 RBFOX1Q9NWB1 397 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 FAM206AQ9NX38 181 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms