RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ZNF682O95780 498 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 SLC2A1P11166 492 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 ZNF823P16415 610 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 AMY2BP19961 511 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 ANOS1P23352 680 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 COX7A1P24310 79 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 GNALP38405 381 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 VDAC2P45880 294 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-219ENST00000556432 CNN3Q15417 329 aaKnown RBP11.28□□□□□ -0.6
ACTN1-219ENST00000556432 TAF13Q15543 124 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 DGUOKQ16854 277 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 FGD3Q5JSP0 725 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 HCP5Q6MZN7 132 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 CYP4Z1Q86W10 505 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 C11orf53Q8IXP5 236 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 Q8N2B8 174 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 OR8J3Q8NGG0 315 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 TSPEARQ8WU66 669 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 AJUBAQ96IF1 538 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 MAP6Q96JE9 813 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 NMNAT3Q96T66 252 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 FN3KQ9H479 309 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 ABCB10Q9NRK6 738 aa11.28□□□□□ -0.6
ACTN1-219ENST00000556432 CDIPTO14735 213 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 TBX1O43435 398 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 PTP4A3O75365 173 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 TIPRLO75663 272 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 GLCEO94923 617 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 DUS4LO95620 317 aaKnown RBP11.27□□□□□ -0.61
ACTN1-219ENST00000556432 CLIC3O95833 236 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 TXNDC12O95881 172 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 ALDOBP05062 364 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 GABRA2P47869 451 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 PRKXP51817 358 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 CAPZA1P52907 286 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 ATPAF1Q5TC12 328 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-219ENST00000556432 DRAM2Q6UX65 266 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 CCDC121Q6ZUS5 278 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 FKBP9P1Q75LS8 142 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 OR2T12Q8NG77 320 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 OR5AU1Q8NGC0 362 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 OR4C15Q8NGM1 316 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 OR4K13Q8NH42 304 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 GAFA1Q96PS6 74 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 PAPOLGQ9BWT3 736 aaKnown RBP11.27□□□□□ -0.61
ACTN1-219ENST00000556432 CDCA4Q9BXL8 241 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 DNTTIP1Q9H147 329 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 WDR13Q9H1Z4 485 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 HEXA-AS1Q9H8Q6 139 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 PCDHGB5Q9Y5G0 923 aa11.27□□□□□ -0.61
ACTN1-219ENST00000556432 UNC119BA6NIH7 251 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 FAM220BPB1ANY3 271 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 XRCC2O43543 280 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 NOS3P29474 1203 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 DDOSTP39656 456 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 RPS27P42677 84 aaKnown RBP11.26□□□□□ -0.61
ACTN1-219ENST00000556432 RAB13P51153 203 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 CAV3P56539 151 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 DCTN2Q13561 401 aaKnown RBP11.26□□□□□ -0.61
ACTN1-219ENST00000556432 IFI44LQ53G44 452 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 KLHL22Q53GT1 634 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 KHDC1LQ5JSQ8 128 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 SMARCD3Q6STE5 483 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 MKXQ8IYA7 352 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 TMEM185AQ8NFB2 350 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 FANK1Q8TC84 345 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 PIFOQ8TCI5 191 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 RPS4Y2Q8TD47 263 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 WIPF2Q8TF74 440 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-219ENST00000556432 RAB3IPQ96QF0 476 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-219ENST00000556432 KRCC1Q9NPI7 259 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-219ENST00000556432 U3KQK5 164 aa11.26□□□□□ -0.61
ACTN1-219ENST00000556432 TCRBV4S1A1TA0A5B7 111 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 MEGF11A6BM72 1044 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 ANXA2P2A6NMY6 339 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 FXYD1O00168 92 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 MRASO14807 208 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 SIGLEC5O15389 551 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 HIST1H1CP16403 213 aaKnown RBP11.25□□□□□ -0.61
ACTN1-219ENST00000556432 FXYD6P3P58550 94 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 COL10A1Q03692 680 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 TIGD6Q17RP2 521 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 GFOD2Q3B7J2 385 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 AGBL2Q5U5Z8 902 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 KCTD8Q6ZWB6 473 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 RNF144BQ7Z419 303 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 SDR9C7Q8NEX9 313 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 RPL3LQ92901 407 aaKnown RBP11.25□□□□□ -0.61
ACTN1-219ENST00000556432 TLCD1Q96CP7 247 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 MICU1Q9BPX6 476 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 CHID1Q9BWS9 393 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 WNT10AQ9GZT5 417 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 MUC13Q9H3R2 512 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 ANKRD19PQ9H560 264 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 CENPMQ9NSP4 180 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 KCNG2Q9UJ96 466 aa11.25□□□□□ -0.61
ACTN1-219ENST00000556432 PITPNC1Q9UKF7 332 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms