RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SHISA8B8ZZ34 492 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 APLNRP35414 380 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 HBG1P69891 147 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 HBG2P69892 147 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 RNF4P78317 190 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 RPL7L1Q6DKI1 246 aaKnown RBP13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 RBMS3Q6XE24 437 aaKnown RBP13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 Q7L0L9 218 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 NR2C2APQ86WQ0 139 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 OXGR1Q96P68 337 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 MED9Q9NWA0 146 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 TRAV20A0A0B4J274 112 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 PLPP3O14495 311 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 SPINT1O43278 529 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 KLF4O43474 513 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 DFFBO76075 338 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 HOXC4P09017 264 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 CCR5P51681 352 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 H2BFSP57053 126 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZNF345Q14585 488 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 NR0B2Q15466 257 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 OR56B2PQ8NGI1 322 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 SLC39A9Q9NUM3 307 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 MYOFQ9NZM1 2061 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 OTOFQ9HC10 1997 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 NSG1A0A0A6YYJ2 146 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 ANKUB1A6NFN9 424 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 ALG1L2C9J202 215 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 AADACP22760 399 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 SSX2Q16385 188 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 C1orf87Q8N0U7 546 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 OR1N1Q8NGS0 311 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZNF845Q96IR2 970 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 MRGPRX4Q96LA9 322 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 RPP25Q9BUL9 199 aaKnown RBP13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZNF426Q9BUY5 554 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 LRRC61Q9BV99 259 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 C19orf12Q9NSK7 152 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 ATG2BQ96BY7 2078 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 CHD5Q8TDI0 1954 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 A0A0G2JK05 382 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 LAMTOR5O43504 91 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 SSSCA1O60232 199 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 CT45A8P0DMV1 189 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 CT45A9P0DMV2 189 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 SP6Q3SY56 376 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 CT45A2Q5DJT8 189 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 DGAT2L6Q6ZPD8 337 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 CATSPERDQ86XM0 798 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 SDSLQ96GA7 329 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 MS4A3Q96HJ5 214 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 TGIF2Q9GZN2 237 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 RAB27BO00194 218 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 GP1BAP07359 652 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 CELA2BP08218 269 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 COL9A1P20849 921 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 KIR3DL2P43630 455 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 OR3A4PP47883 348 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 NOXO1Q8NFA2 376 aa13.43□□□□□ -0.26
ARHGEF40-207ENST00000556399 DICER1Q9UPY3 1922 aaKnown RBP13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 FIGNL2A6NMB9 653 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 BCAT2O15382 392 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 MRPL33O75394 65 aaKnown RBP13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 FABP1P07148 127 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 ADIRFQ15847 76 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 OR51F2Q8NH61 342 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 GPBAR1Q8TDU6 330 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 NMES1Q9C002 83 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 DNAJB11Q9UBS4 358 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 NGFRP08138 427 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 SSR4P51571 173 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 ECH1Q13011 328 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 SKP2Q13309 424 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 MITD1Q8WV92 249 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 RAB39BQ96DA2 213 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 GNPNAT1Q96EK6 184 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 NPDC1Q9NQX5 325 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZNF107Q9UII5 783 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 VSIG4Q9Y279 399 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 SPTBP11277 2137 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 A0A1W2PPC4 97 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 CDC14BO60729 498 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 ENPP1P22413 925 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 CLEC18BQ6UXF7 455 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 FAM74A7A6NL05 159 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 SLC25A4P12235 298 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 FAM74A3Q4VXF1 159 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 UNQ9370/PRO34162Q6UXP9 181 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZNF813Q6ZN06 617 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 TMEM123Q8N131 208 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 CPT1CQ8TCG5 803 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 RXFP4Q8TDU9 374 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 SAT2Q96F10 170 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 ADAT1Q9BUB4 502 aaKnown RBP13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 SEC11CQ9BY50 192 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 GNG13Q9P2W3 67 aa13.42□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZNF98A6NK75 572 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 CARD18P57730 90 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 FABP9Q0Z7S8 132 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 SLC16A13Q7RTY0 426 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms