RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TREM2Q9NZC2 230 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 ZNF391Q9UJN7 358 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 IKZF2Q9UKS7 526 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 RHBDD3Q9Y3P4 386 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 R4GMQ9 66 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 LOC100289279A0A1B0GTE1 492 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 H0YJX3 145 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 CD5LO43866 347 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 GMDSO60547 372 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 FAM20BO75063 409 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 CST4P01036 141 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 TTRP02766 147 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 KRT8P05787 483 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 GNAO1P09471 354 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 IGHV4-31P0DP07 118 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 TNFRSF1AP19438 455 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 IL2RGP31785 369 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 ATP6V1E1P36543 226 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 CAPGP40121 348 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 SRP9P49458 86 aaKnown RBP8.13□□□□□ -1.11
SRP54-210ENST00000556380 LMO4P61968 165 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 IL18R1Q13478 541 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 ZNF829Q3KNS6 432 aaPredicted RBP8.13□□□□□ -1.11
SRP54-210ENST00000556380 CDONQ4KMG0 1287 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 PLEKHG7Q6ZR37 379 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 KCTD20Q7Z5Y7 419 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 CATSPERDQ86XM0 798 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 EGFL6Q8IUX8 553 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 ACBD7Q8N6N7 88 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 CSNK2A3Q8NEV1 391 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 OR51E1Q8TCB6 317 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 Q8TCH9 128 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 VCXQ9H320 206 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 FGF20Q9NP95 211 aaPredicted RBP8.13□□□□□ -1.11
SRP54-210ENST00000556380 GPR84Q9NQS5 396 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 TMEM106BQ9NUM4 274 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 FRRS1LQ9P0K9 344 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 OR52A1Q9UKL2 312 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 MYRFQ9Y2G1 1151 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 RPL36Q9Y3U8 105 aaKnown RBP8.13□□□□□ -1.11
SRP54-210ENST00000556380 WIPI2Q9Y4P8 454 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 PCDHGB1Q9Y5G3 927 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 SNX5Q9Y5X3 404 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 HSPE1-MOB4S4R3N1 261 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 ATRQ13535 2644 aa8.13□□□□□ -1.11
SRP54-210ENST00000556380 MALRD1Q5VYJ5 2156 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 ANKRD30BLA7E2S9 258 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 CLDN25C9JDP6 229 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 LOC110117498-PIK3R3F6TDL0 507 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 TMEM178BH3BS89 294 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 IFNL4K9M1U5 179 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 IGHV2-70P01814 119 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 ATP6V1B1P15313 513 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 CCL1P22362 96 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 CHN2P52757 468 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 OR12D2P58182 307 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 ACTC1P68032 377 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 ACTA1P68133 377 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 IL5RAQ01344 420 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 SLC3A1Q07837 685 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 RAB40BQ12829 278 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 RIPK1Q13546 671 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 GALEQ14376 348 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 OR8G1Q15617 311 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 MPPED2Q15777 294 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 ZNF181Q2M3W8 571 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 GFOD2Q3B7J2 385 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 TP53I3Q53FA7 332 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 FDX2Q6P4F2 183 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 Q71RC1 249 aaPredicted RBP8.12□□□□□ -1.11
SRP54-210ENST00000556380 WDR86Q86TI4 376 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 MOGAT3Q86VF5 341 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 LRRC28Q86X40 367 aaPredicted RBP8.12□□□□□ -1.11
SRP54-210ENST00000556380 C11orf53Q8IXP5 236 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 PRSS35Q8N3Z0 413 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 YIPF7Q8N8F6 280 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 SPERTQ8NA61 448 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 OR52I1Q8NGK6 324 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 CLDND2Q8NHS1 167 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 CNIH3Q8TBE1 160 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 DVL3Q92997 716 aaPredicted RBP8.12□□□□□ -1.11
SRP54-210ENST00000556380 ERGIC1Q969X5 290 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 MSI2Q96DH6 328 aaKnown RBP8.12□□□□□ -1.11
SRP54-210ENST00000556380 MYCBPQ99417 103 aaPredicted RBP8.12□□□□□ -1.11
SRP54-210ENST00000556380 ADAT1Q9BUB4 502 aaKnown RBP8.12□□□□□ -1.11
SRP54-210ENST00000556380 JAM3Q9BX67 310 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 FGF23Q9GZV9 251 aaPredicted RBP8.12□□□□□ -1.11
SRP54-210ENST00000556380 MOB1AQ9H8S9 216 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 ACOXLQ9NUZ1 547 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 PPP1R3CQ9UQK1 317 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 SLC22A13Q9Y226 551 aa8.12□□□□□ -1.11
SRP54-210ENST00000556380 NOP16Q9Y3C1 178 aaKnown RBP8.12□□□□□ -1.11
SRP54-210ENST00000556380 DYSFO75923 2080 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 IGHV3-64DA0A0J9YX35 117 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 SCO2A0A1W2PP80 73 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 DAPL1A0PJW8 107 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 RPP14O95059 124 aaKnown RBP8.11□□□□□ -1.11
SRP54-210ENST00000556380 FSTL3O95633 263 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 FADS2O95864 444 aaKnown RBP8.11□□□□□ -1.11
SRP54-210ENST00000556380 H2AFB1P0C5Y9 115 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms