RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PPP1R1AQ13522 171 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 PGAP1Q75T13 922 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 RAB11FIP2Q7L804 512 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 PRR18Q8N4B5 295 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 ZNF519Q8TB69 540 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 RAB33BQ9H082 229 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 HDGFL3Q9Y3E1 203 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 TO15178 435 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 KCNAB3O43448 404 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 SERPINF1P36955 418 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 SULF2Q8IWU5 870 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 NANPQ8TBE9 248 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 C2CD4CQ8TF44 421 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 DNASE2BQ8WZ79 361 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 PFDN5Q99471 154 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 USB1Q9BQ65 265 aaKnown RBP13.17□□□□□ -0.3
NEK9-209ENST00000556170 PAPOLGQ9BWT3 736 aaKnown RBP13.17□□□□□ -0.3
NEK9-209ENST00000556170 DNAH14Q0VDD8 3507 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 CLPSP04118 112 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 IL5P05113 134 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 CHRM2P08172 466 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 CBR1P16152 277 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 KLK2P20151 261 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 PAN3Q58A45 887 aaKnown RBP13.16□□□□□ -0.3
NEK9-209ENST00000556170 MCRIP1C9JLW8 97 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 MGMTP16455 207 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 ZNF16P17020 682 aaPredicted RBP13.16□□□□□ -0.3
NEK9-209ENST00000556170 RGS19P49795 217 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 GRB2P62993 217 aaKnown RBP13.16□□□□□ -0.3
NEK9-209ENST00000556170 MC2RQ01718 297 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 PLPPR5Q32ZL2 321 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 P4HA3Q7Z4N8 544 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 CARFQ8N187 725 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 RNF133Q8WVZ7 376 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 B4GALT7Q9UBV7 327 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 HSPA12AO43301 675 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 VSIG8P0DPA2 414 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 TMEM104Q8NE00 496 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 ARRDC1-AS1Q9H2J1 176 aa13.16□□□□□ -0.3
NEK9-209ENST00000556170 TRBV5-7A0A0A0MS05 114 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 PHLDA2Q53GA4 152 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 SGPP2Q8IWX5 399 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 ZFP82Q8N141 532 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 ZNF565Q8N9K5 539 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 RADILQ96JH8 1075 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 SPSB2Q99619 263 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 PARP12Q9H0J9 701 aaKnown RBP13.15□□□□□ -0.3
NEK9-209ENST00000556170 LRFN1Q9P244 771 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 NOSIPQ9Y314 301 aaKnown RBP13.15□□□□□ -0.3
NEK9-209ENST00000556170 hCG_1807616A0A1W2PRN6 198 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 ZNF98A6NK75 572 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 RAB5BP61020 215 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 HLXQ14774 488 aaPredicted RBP13.15□□□□□ -0.3
NEK9-209ENST00000556170 KISS1Q15726 138 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 ATPAF1Q5TC12 328 aaPredicted RBP13.15□□□□□ -0.3
NEK9-209ENST00000556170 DEGS2Q6QHC5 323 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 TMEM229BQ8NBD8 167 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 OR2M3Q8NG83 312 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 OPN4Q9UHM6 478 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 COLQQ9Y215 455 aaPredicted RBP13.15□□□□□ -0.3
NEK9-209ENST00000556170 CPT2P23786 658 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 ZP1P60852 638 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 ZNF169Q14929 603 aaPredicted RBP13.15□□□□□ -0.3
NEK9-209ENST00000556170 KCNK17Q96T54 332 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 PLA2G3Q9NZ20 509 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 PCDH15Q96QU1 1955 aa13.15□□□□□ -0.3
NEK9-209ENST00000556170 RBMXL2O75526 392 aaKnown RBP13.14□□□□□ -0.31
NEK9-209ENST00000556170 MMP16P51512 607 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 FLI1Q01543 452 aaPredicted RBP13.14□□□□□ -0.31
NEK9-209ENST00000556170 ROM1Q03395 351 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 CEACAM16Q2WEN9 425 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 HRH4Q9H3N8 390 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 LOXL2Q9Y4K0 774 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 CD1AP06126 327 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 ZNF14P17017 642 aaPredicted RBP13.14□□□□□ -0.31
NEK9-209ENST00000556170 CLDN15P56746 228 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 ZNF774Q6NX45 483 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 MRPL21Q7Z2W9 205 aaKnown RBP13.14□□□□□ -0.31
NEK9-209ENST00000556170 EXD3Q8N9H8 876 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 SEMA6DQ8NFY4 1073 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 GPX8Q8TED1 209 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 LIPHQ8WWY8 451 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 METTL9Q9H1A3 318 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 POLEQ07864 2286 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 D6RAR5 112 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 BET1O15155 118 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 SHOXO15266 292 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 FAM157BP0CG42 384 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 CXCL2P19875 107 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 ATP1B3P54709 279 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 C12orf49Q9H741 205 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 CSAG2Q9Y5P2 127 aa13.14□□□□□ -0.31
NEK9-209ENST00000556170 CBR3O75828 277 aa13.13□□□□□ -0.31
NEK9-209ENST00000556170 VAMP5O95183 116 aa13.13□□□□□ -0.31
NEK9-209ENST00000556170 BPNT1O95861 308 aa13.13□□□□□ -0.31
NEK9-209ENST00000556170 GNRHRP30968 328 aa13.13□□□□□ -0.31
NEK9-209ENST00000556170 EFNA3P52797 238 aa13.13□□□□□ -0.31
NEK9-209ENST00000556170 STARD6P59095 220 aa13.13□□□□□ -0.31
NEK9-209ENST00000556170 ZNF616Q08AN1 781 aa13.13□□□□□ -0.31
NEK9-209ENST00000556170 C6orf201Q7Z4U5 140 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms