RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SEMG1P04279 462 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 WNT2P09544 360 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 ACSM4P0C7M7 580 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 RAP2AP10114 183 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 PYCR1P32322 319 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 CD80P33681 288 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 GGT2P36268 569 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 RPS27P42677 84 aaKnown RBP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 GSSP48637 474 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 COMPP49747 757 aaPredicted RBP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 RAD23AP54725 363 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 TPTEP56180 551 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 PPP1R8Q12972 351 aaKnown RBP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 ECH1Q13011 328 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 BAMBIQ13145 260 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 GK2Q14410 553 aaPredicted RBP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 RSPO1Q2MKA7 263 aaPredicted RBP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 FAM98BQ52LJ0 330 aaKnown RBP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 ANKRD39Q53RE8 183 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 AWAT1Q58HT5 328 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 KLF17Q5JT82 389 aaPredicted RBP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 ZNF620Q6ZNG0 422 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 PGAP1Q75T13 922 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 OVCH2Q7RTZ1 564 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 TMEM179BQ7Z7N9 219 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 KLBQ86Z14 1044 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 ZDHHC21Q8IVQ6 265 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 C1orf87Q8N0U7 546 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 LNX2Q8N448 690 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 BOLLQ8N9W6 283 aaKnown RBP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 C19orf18Q8NEA5 215 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 PROKR2Q8NFJ6 384 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 OR9Q2Q8NGE9 314 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 OR8B3Q8NGG8 313 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 OR52L1Q8NGH7 329 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 OR51L1Q8NGJ5 315 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 OR11L1Q8NGX0 322 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 GNPDA2Q8TDQ7 276 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 TFAP2CQ92754 450 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 SPTSSAQ969W0 71 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 ZMYND19Q96E35 227 aaPredicted RBP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 NEIL1Q96FI4 390 aaPredicted RBP5.6□□□□□ -1.51
PSEN1-216ENST00000556066 PLEKHA8Q96JA3 519 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 Q96M66 194 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 OR8B2Q96RD0 313 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 TMEM246Q9BRR3 403 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 YIPF3Q9GZM5 350 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 EGLN3Q9H6Z9 239 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 TMEM165Q9HC07 324 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 IL1RAPQ9NPH3 570 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 AASSQ9UDR5 926 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 MIOXQ9UGB7 285 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 CYB5R1Q9UHQ9 305 aa5.6□□□□□ -1.51
PSEN1-216ENST00000556066 TRAV40A0A0B4J280 105 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 IGHV2-70DA0A0C4DH43 119 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 PGPEP1LA6NFU8 196 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 GGT3PA6NGU5 568 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 M0R135 149 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 TNFRSF11BO00300 401 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 SPRY1O43609 319 aaPredicted RBP5.59□□□□□ -1.51
PSEN1-216ENST00000556066 FAM20BO75063 409 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 TUSC2O75896 110 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 CLIC3O95833 236 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 GYPBP06028 91 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 GNAO1P09471 354 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 IGHV4-38-2P0DP08 117 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 CA6P23280 308 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 PRTN3P24158 256 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 PMELP40967 661 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 PITPNBP48739 271 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 HOXA4Q00056 320 aaPredicted RBP5.59□□□□□ -1.51
PSEN1-216ENST00000556066 PAX8Q06710 450 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 FOXL1Q12952 345 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 TSPAN31Q12999 210 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 MAB21L1Q13394 359 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 TAF13Q15543 124 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 OR8G1Q15617 311 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 MPPED2Q15777 294 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 ZIK1Q3SY52 487 aaPredicted RBP5.59□□□□□ -1.51
PSEN1-216ENST00000556066 ZNF404Q494X3 552 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 PRAMEF6Q5VXH4 476 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 SFRP4Q6FHJ7 346 aaPredicted RBP5.59□□□□□ -1.51
PSEN1-216ENST00000556066 LYPD2Q6UXB3 125 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 LRRN1Q6UXK5 716 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 COLCA1Q6ZS62 124 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 DOK3Q7L591 496 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 HS3ST5Q8IZT8 346 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 PARP8Q8N3A8 854 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 OR9Q1Q8NGQ5 310 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 OR2T4Q8NH00 348 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 OR2AE1Q8NHA4 323 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 CYGBQ8WWM9 190 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 RAB40AQ8WXH6 277 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 ZNF799Q96GE5 643 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 MAP6Q96JE9 813 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 ZNF48Q96MX3 618 aaPredicted RBP5.59□□□□□ -1.51
PSEN1-216ENST00000556066 TECTBQ96PL2 329 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 COPS4Q9BT78 406 aa5.59□□□□□ -1.51
PSEN1-216ENST00000556066 ADI1Q9BV57 179 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms