RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ASF1BQ9NVP2 202 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 PARPBPQ9NWS1 579 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 EMC3Q9P0I2 261 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 EXTL2Q9UBQ6 330 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 MCTS1Q9ULC4 181 aaKnown RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 SLC22A13Q9Y226 551 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 FLVCR1Q9Y5Y0 555 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 A0A1B0GVC2 190 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 A0A1B0GVI7 797 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 OR6C65A6NJZ3 312 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 IFITM5A6NNB3 132 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF716A6NP11 495 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 H0YC42 278 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 AIPO00170 330 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 SRSF10O75494 262 aaKnown RBP5.96□□□□□ -1.46
SLIRP-204ENST00000555890 CEACAM4O75871 244 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 KRT33AO76009 404 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 CNOT4O95628 575 aaKnown RBP5.96□□□□□ -1.46
SLIRP-204ENST00000555890 IL7P13232 177 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 ATF1P18846 271 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 AZGP1P25311 298 aaKnown RBP5.96□□□□□ -1.46
SLIRP-204ENST00000555890 CDAP32320 146 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 THBS2P35442 1172 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 NR4A2P43354 598 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 PITPNBP48739 271 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 SELENOPP49908 381 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 LHX2P50458 406 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 TNFSF10P50591 281 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 CLDN18P56856 261 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 MRPS34P82930 218 aaKnown RBP5.96□□□□□ -1.46
SLIRP-204ENST00000555890 SRYQ05066 204 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 MFGE8Q08431 387 aaPredicted RBP5.96□□□□□ -1.46
SLIRP-204ENST00000555890 RIN1Q13671 783 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 RNPS1Q15287 305 aaKnown RBP5.96□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF79Q15937 498 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 PLEKHN1Q494U1 663 aaPredicted RBP5.96□□□□□ -1.46
SLIRP-204ENST00000555890 UBE2NLQ5JXB2 153 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 HES5Q5TA89 166 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 RIPPLY2Q5TAB7 128 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 FAM27BQ5VT28 67 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 HACD4Q5VWC8 232 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 TRIQKQ629K1 86 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 PYHIN1Q6K0P9 492 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 FOXL2NBQ6ZUU3 175 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 NR2C2APQ86WQ0 139 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 ELMOD2Q8IZ81 293 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 RDH10Q8IZV5 341 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF283Q8N7M2 679 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 C19orf18Q8NEA5 215 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 IL17RDQ8NFM7 739 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 OR13C3Q8NGS6 347 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 C15orf40Q8WUR7 153 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 TMEM45BQ96B21 275 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 PPP1R14BQ96C90 147 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 DMRTA2Q96SC8 542 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 SDHCQ99643 169 aaPredicted RBP5.96□□□□□ -1.46
SLIRP-204ENST00000555890 SOSTQ9BQB4 213 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 WACQ9BTA9 647 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 C19orf24Q9BVV8 132 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF416Q9BWM5 594 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 PBOV1Q9GZY1 135 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 SLC6A15Q9H2J7 730 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 PPP1R3EQ9H7J1 279 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 RNF122Q9H9V4 155 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 G6PC2Q9NQR9 355 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 CYSLTR2Q9NS75 346 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 FAM206AQ9NX38 181 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 FBXL3Q9UKT7 428 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 SPATA2Q9UM82 520 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 FOXJ3Q9UPW0 622 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 NOSIPQ9Y314 301 aaKnown RBP5.96□□□□□ -1.46
SLIRP-204ENST00000555890 ETV7Q9Y603 341 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 LHFPL6Q9Y693 200 aa5.96□□□□□ -1.46
SLIRP-204ENST00000555890 IGKV3D-15A0A087WSY6 115 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 TRGV5A0A0B4J1U4 118 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 TRAV17A0A0B4J275 112 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 J3KRW8 73 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 P2RY10O00398 339 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 SYT7O43581 403 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 MRPL33O75394 65 aaKnown RBP5.95□□□□□ -1.46
SLIRP-204ENST00000555890 FARS2O95363 451 aaKnown RBP5.95□□□□□ -1.46
SLIRP-204ENST00000555890 MAS1P04201 325 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 EIF4EP06730 217 aaKnown RBP5.95□□□□□ -1.46
SLIRP-204ENST00000555890 CST2P09228 141 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 CPN1P15169 458 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 EGR1P18146 543 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 CTSSP25774 331 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 MAGEB1P43366 347 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 PRKXP51817 358 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 CAPZA1P52907 286 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 PCBD1P61457 104 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 HIST1H3AP68431 136 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 SCRN3Q0VDG4 424 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 ECH1Q13011 328 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 ASAH1Q13510 395 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 STK11Q15831 433 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 KRTAP24-1Q3LI83 254 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 PHYHD1Q5SRE7 291 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 HIST2H3PS2Q5TEC6 136 aa5.95□□□□□ -1.46
SLIRP-204ENST00000555890 GLT8D1Q68CQ7 371 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms