RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 HORMAD1Q86X24 394 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 DRAM1Q8N682 238 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 TTC29Q8NA56 475 aaPredicted RBP0.64□□□□□ -2.31
SRP54-207ENST00000555535 LRRC75AQ8NAA5 344 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 OR7G2Q8NG99 324 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 OR4D6Q8NGJ1 314 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 OR5AR1Q8NGP9 310 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 CT45A3Q8NHU0 189 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 RAB3IL1Q8TBN0 382 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 CA5BP1Q8WTZ4 195 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 RAB1CQ92928 201 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 YIPF6Q96EC8 236 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 SGTBQ96EQ0 304 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 KCNS1Q96KK3 526 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 DERL3Q96Q80 235 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 OR2V2Q96R30 315 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 UCK2Q9BZX2 261 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 FBXO8Q9NRD0 319 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 PDP1Q9P0J1 537 aaPredicted RBP0.64□□□□□ -2.31
SRP54-207ENST00000555535 MCTS1Q9ULC4 181 aaKnown RBP0.64□□□□□ -2.31
SRP54-207ENST00000555535 R4GN34 69 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 VWDEQ8N2E2 1590 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 FHOD3Q2V2M9 1422 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 IGKV1-6A0A0C4DH72 117 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 A0A1B0GUH1 482 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 PDZK1P1A8MUH7 402 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 A8MWL6 223 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 CENPBD1B2RD01 187 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 H0Y8G0 127 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 NDUFAB1O14561 156 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 AQP9O43315 295 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 OR7C2O60412 319 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 HPRT1P00492 218 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 IGKV1-39P01597 117 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 IGHMP01871 453 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 HBE1P02100 147 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 MAS1P04201 325 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 IGKV1D-39P04432 117 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 SEC11BP0C7V7 166 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 CTRB1P17538 263 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 HMOX2P30519 316 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 MYCNOSP40205 109 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 NBL1P41271 181 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 SULT1E1P49888 294 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ATP5IP56385 69 aaPredicted RBP0.63□□□□□ -2.31
SRP54-207ENST00000555535 C21orf59P57076 290 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 RGS8P57771 180 aaPredicted RBP0.63□□□□□ -2.31
SRP54-207ENST00000555535 ZNF121P58317 390 aaPredicted RBP0.63□□□□□ -2.31
SRP54-207ENST00000555535 RPS15AP62244 130 aaKnown RBP0.63□□□□□ -2.31
SRP54-207ENST00000555535 IL5RAQ01344 420 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ZNF141Q15928 474 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 GABRA6Q16445 453 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 LDLRAD2Q5SZI1 272 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 CPTPQ5TA50 214 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 TMEM236Q5W0B7 351 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 TMPRSS11AQ6ZMR5 421 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 TAS2R42Q7RTR8 314 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 PAGE2Q7Z2X7 111 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 RAB43Q86YS6 212 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ITPRIPQ8IWB1 547 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 VKORC1L1Q8N0U8 176 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ORMDL3Q8N138 153 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ARL6IP6Q8N6S5 226 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 C19orf18Q8NEA5 215 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 BPIFCQ8NFQ6 507 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 OR4C13Q8NGP0 309 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 OR51F2Q8NH61 342 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 OR1L1Q8NH94 360 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ZNF420Q8TAQ5 688 aaPredicted RBP0.63□□□□□ -2.31
SRP54-207ENST00000555535 CMTM2Q8TAZ6 248 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ACTL9Q8TC94 416 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 RXFP2Q8WXD0 754 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 N4BP2L2Q92802 583 aaPredicted RBP0.63□□□□□ -2.31
SRP54-207ENST00000555535 SLC38A4Q969I6 547 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 RPEQ96AT9 228 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 TPD52L3Q96J77 140 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 Q96MT0 163 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 SCGB3A2Q96PL1 93 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ALS2CR12Q96Q35 445 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 GSDMAQ96QA5 445 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 MS4A8Q9BY19 250 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ZYG11BQ9C0D3 744 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ZNF442Q9H7R0 627 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 CYP3A43Q9HB55 503 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 NEK6Q9HC98 313 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ZNF160Q9HCG1 818 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 OR2S2Q9NQN1 319 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 ZNF302Q9NR11 478 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 CA10Q9NS85 328 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 TAS2R1Q9NYW7 299 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 IL37Q9NZH6 218 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 GCNT4Q9P109 453 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 HPCAL4Q9UM19 191 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 RCL1Q9Y2P8 373 aaKnown RBP0.63□□□□□ -2.31
SRP54-207ENST00000555535 YARS2Q9Y2Z4 477 aaKnown RBP0.63□□□□□ -2.31
SRP54-207ENST00000555535 SSH2Q76I76 1423 aa0.63□□□□□ -2.31
SRP54-207ENST00000555535 YLPM1P49750 1951 aaKnown RBP0.63□□□□□ -2.31
SRP54-207ENST00000555535 SIGLEC1Q9BZZ2 1709 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 A0A0A6YYD5 115 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 TRBV9A0A0B4J1U6 114 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms