RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 INO80EQ8NBZ0 244 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 OR8U1Q8NH10 309 aa3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 RPEQ96AT9 228 aa3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 ISG20Q96AZ6 181 aaKnown RBP3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 FLYWCH2Q96CP2 140 aaKnown RBP3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 GPR21Q99679 349 aa3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 MYOZ1Q9NP98 299 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 ZDHHC4Q9NPG8 344 aa3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 CHRAC1Q9NRG0 131 aa3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 LMO7Q8WWI1 1683 aa3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 ARID1AO14497 2285 aa3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 MAP2P11137 1827 aaKnown RBP3.26□□□□□ -1.89
CKS1BP1-201ENST00000555221 GLI3P10071 1580 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 PHLPP2Q6ZVD8 1323 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 MYO10Q9HD67 2058 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 DENND4AQ7Z401 1863 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 TRAV19A0A0A6YYK7 116 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 IGHV1OR15-9A0A0B4J2B8 117 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 H7C1H1 209 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 NME4O00746 187 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 RBFOX2O43251 390 aaKnown RBP eCLIP3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 AKR7A2O43488 359 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 SLC22A5O76082 557 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 KRT16P08779 473 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 USF1P22415 310 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 CD82P27701 267 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 PFN2P35080 140 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 NBL1P41271 181 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 RAB7AP51149 207 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 LINC00315P59091 139 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 RPS15AP62244 130 aaKnown RBP3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 RAB11AP62491 216 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 DGCR6Q14129 220 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 RAB11BQ15907 218 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 KLHL40Q2TBA0 621 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 TMEM205Q6UW68 189 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 ZNF547Q8IVP9 402 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 NKAIN4Q8IVV8 208 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 CDKL3Q8IVW4 592 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 OR10G6Q8NH81 332 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 RNF145Q96MT1 663 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 ZNF317Q96PQ6 595 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 TMEM27Q9HBJ8 222 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 CRLF2Q9HC73 371 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 YARS2Q9Y2Z4 477 aaKnown RBP3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 COL18A1P39060 1754 aa3.25□□□□□ -1.89
CKS1BP1-201ENST00000555221 PLCH1Q4KWH8 1693 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 IGHV3OR16-9A0A0B4J2B5 98 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 A0A0J9YXV3 536 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 GABRPO00591 440 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 ADRA2AP08913 450 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 RAB5AP20339 215 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 FABP6P51161 128 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 ZNF33AQ06730 810 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 SLC39A6Q13433 755 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 SNRNP35Q16560 246 aaKnown RBP3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 ADNP2Q6IQ32 1131 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 RWDD4Q6NW29 188 aaKnown RBP3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 WDR82Q6UXN9 313 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 OR51F2Q8NH61 342 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 ITFG1Q8TB96 612 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 CA5BP1Q8WTZ4 195 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 SPIN2AQ99865 258 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 SPIN2BQ9BPZ2 258 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 BLZF1Q9H2G9 400 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 MCUBQ9NWR8 336 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 PEF1Q9UBV8 284 aaKnown RBP3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 PARP4Q9UKK3 1724 aaKnown RBP3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 THSD7AQ9UPZ6 1657 aa3.24□□□□□ -1.89
CKS1BP1-201ENST00000555221 KIF20BQ96Q89 1820 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 TRAV6A0A075B6T7 132 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 IGHV1-69DA0A0B4J2H0 117 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 PLPP1O14494 284 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 FOXH1O75593 365 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 REM1O75628 298 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 GLAP06280 429 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 C1GALT1C1LP0DN25 315 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 MYL9P24844 172 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 GPR1P46091 355 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 TFDP2Q14188 446 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 ABCA11PQ4W5N1 156 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 ZNF684Q5T5D7 378 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 FAM122BQ7Z309 247 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 WDFY1Q8IWB7 410 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 MYOCDQ8IZQ8 938 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 LGI3Q8N145 548 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 CSGALNACT2Q8N6G5 542 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 LRRC75AQ8NAA5 344 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 OR4K5Q8NGD3 323 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 RAB1CQ92928 201 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 HAUS1Q96CS2 278 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 CSPG4P5Q96PW8 444 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 RNF157Q96PX1 679 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 OR52D1Q9H346 318 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 C8orf33Q9H7E9 229 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 RPRD1BQ9NQG5 326 aaKnown RBP3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 LTN1O94822 1766 aa3.23□□□□□ -1.89
CKS1BP1-201ENST00000555221 USP42Q9H9J4 1324 aaKnown RBP3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 NRAPQ86VF7 1730 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 ANKRD65E5RJM6 399 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms