RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 COMMD2Q86X83 199 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 CBR4Q8N4T8 237 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF555Q8NEP9 628 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 OR14K1Q8NGZ2 314 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 IPCEF1Q8WWN9 437 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-231ENST00000554994 DNAJC9Q8WXX5 260 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 CFHR4Q92496 578 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 CCL17Q92583 94 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 APOBEC3DQ96AK3 386 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-231ENST00000554994 MARS2Q96GW9 593 aaKnown RBP3.95□□□□□ -1.78
ATXN3-231ENST00000554994 PGAM5Q96HS1 289 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 COG8Q96MW5 612 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF582Q96NG8 517 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-231ENST00000554994 SNX18Q96RF0 628 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 TBX5Q99593 518 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 TEAD3Q99594 435 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 KCNJ15Q99712 375 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 RBM4BQ9BQ04 359 aaKnown RBP3.95□□□□□ -1.78
ATXN3-231ENST00000554994 PIMREGQ9BSJ6 248 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 C9orf16Q9BUW7 83 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 ABHD6Q9BV23 337 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 RBM4Q9BWF3 364 aaKnown RBP3.95□□□□□ -1.78
ATXN3-231ENST00000554994 OSBPL10Q9BXB5 764 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 EGLN1Q9GZT9 426 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 RACGAP1Q9H0H5 632 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 HDHD2Q9H0R4 259 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 BATF3Q9NR55 127 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 CMC2Q9NRP2 79 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 TMEM100Q9NV29 134 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 CYB5R1Q9UHQ9 305 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 ENOPH1Q9UHY7 261 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 KCNG2Q9UJ96 466 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 FBXO9Q9UK97 447 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-231ENST00000554994 IKZF2Q9UKS7 526 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 KCNS2Q9ULS6 477 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 GMPPBQ9Y5P6 360 aa3.95□□□□□ -1.78
ATXN3-231ENST00000554994 RYR2Q92736 4967 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 IGHV1-69-2A0A0G2JMI3 117 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 LOC390937A0A1W2PQ73 354 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 TMEM89A2RUT3 159 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 LRP5LA4QPB2 252 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 C17orf100A8MU93 164 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 FAM157AC9JC47 383 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF670-ZNF695F2Z2N8 137 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 H0YL77 283 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 H3BNX3 289 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 H3BSH0 61 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 H7C417 338 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 M0R135 149 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 EI24O14681 340 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 MAGEB4O15481 346 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-231ENST00000554994 RPP14O95059 124 aaKnown RBP3.94□□□□□ -1.78
ATXN3-231ENST00000554994 APOL3O95236 402 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 SNAP29O95721 258 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 IGHV3-13P01766 116 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 HLA-DPB1P04440 258 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 GRPP07492 148 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 LYNP07948 512 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 ACSM4P0C7M7 580 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 GAAP10253 952 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 COX5BP10606 129 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF250P15622 560 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 USF1P22415 310 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-231ENST00000554994 EPHA2P29317 976 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 LIPAP38571 399 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 GPR6P46095 362 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-231ENST00000554994 CX3CR1P49238 355 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 EVX1P49640 407 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 RGS6P49758 472 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 PPOXP50336 477 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 CDC42P60953 191 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 GRB2P62993 217 aaKnown RBP3.94□□□□□ -1.78
ATXN3-231ENST00000554994 RCN1Q15293 331 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 OR8G1Q15617 311 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 TRIP10Q15642 601 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 ODF4Q2M2E3 257 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 HFEQ30201 348 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 AVPI1Q5T686 147 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 MBNL2Q5VZF2 373 aaKnown RBP3.94□□□□□ -1.78
ATXN3-231ENST00000554994 LPCAT4Q643R3 524 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 KDM4DQ6B0I6 523 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 CYB5R2Q6BCY4 276 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 LRRN1Q6UXK5 716 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 PGAP1Q75T13 922 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 SLC16A9Q7RTY1 509 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 PEG10Q86TG7 708 aaKnown RBP3.94□□□□□ -1.78
ATXN3-231ENST00000554994 C1orf174Q8IYL3 243 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 PQLC1Q8N2U9 271 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 YIPF7Q8N8F6 280 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF540Q8NDQ6 660 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 SEMA6DQ8NFY4 1073 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 OR10H4Q8NGA5 316 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 OR51G2Q8NGK0 314 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 OR13G1Q8NGZ3 307 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 OR2AE1Q8NHA4 323 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 FAM81AQ8TBF8 368 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 TMEM163Q8TC26 289 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 CYGBQ8WWM9 190 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 RDH5Q92781 318 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 HAVCR1Q96D42 359 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms