RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PHC2Q8IXK0 858 aa14.02□□□□□ -0.16
SPTLC2-203ENST00000554901 OR5AS1Q8N127 324 aa14.02□□□□□ -0.16
SPTLC2-203ENST00000554901 SPERTQ8NA61 448 aa14.02□□□□□ -0.16
SPTLC2-203ENST00000554901 PP6455Q8WZ26 134 aa14.02□□□□□ -0.16
SPTLC2-203ENST00000554901 MRPS26Q9BYN8 205 aaKnown RBP14.02□□□□□ -0.16
SPTLC2-203ENST00000554901 PIGLQ9Y2B2 252 aa14.02□□□□□ -0.16
SPTLC2-203ENST00000554901 LRBAP50851 2863 aa14.02□□□□□ -0.17
SPTLC2-203ENST00000554901 DSCAMO60469 2012 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 TRBV5-5A0A0J9YX44 114 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 SERPINA3P01011 423 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 PSMB9P28065 219 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 GNALP38405 381 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 PRSS12P56730 875 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 TMEM42Q69YG0 159 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 OR13C3Q8NGS6 347 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 RGP1Q92546 391 aaPredicted RBP14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 NINJ1Q92982 152 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 MUL1Q969V5 352 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 TECTBQ96PL2 329 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 CACNG6Q9BXT2 260 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 DHDHQ9UQ10 334 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 RHBDD3Q9Y3P4 386 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 AKAP6Q13023 2319 aa14.01□□□□□ -0.17
SPTLC2-203ENST00000554901 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14□□□□□ -0.17
SPTLC2-203ENST00000554901 PNMA8CA0A1B0GUJ8 204 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 ZSCAN5BA6NJL1 495 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 CCRL2O00421 344 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 LILRA1O75019 489 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 INMTO95050 263 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 CD55P08174 381 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 SMIM18P0DKX4 95 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 PAX1P15863 534 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 FAHP16930 419 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 TNFSF4P23510 183 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 MAPK3P27361 379 aaPredicted RBP14□□□□□ -0.17
SPTLC2-203ENST00000554901 GABRA5P31644 462 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 RPS11P62280 158 aaKnown RBP eCLIP14□□□□□ -0.17
SPTLC2-203ENST00000554901 MZT1Q08AG7 82 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 NEDD8Q15843 81 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 Q499Y3 187 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 CLVS2Q5SYC1 327 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 Q6ZR03 302 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 PARP16Q8N5Y8 322 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 OR51A4Q8NGJ6 313 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 OR10AC1Q8NH08 325 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 TSEN15Q8WW01 171 aaKnown RBP14□□□□□ -0.17
SPTLC2-203ENST00000554901 LURAP1Q96LR2 239 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 PAPOLGQ9BWT3 736 aaKnown RBP14□□□□□ -0.17
SPTLC2-203ENST00000554901 RAB1BQ9H0U4 201 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 LIME1Q9H400 295 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 MSL2Q9HCI7 577 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 NDUFB11Q9NX14 153 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 ARFGEF3Q5TH69 2177 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 ANXA2P2A6NMY6 339 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 GATBO75879 557 aaKnown RBP14□□□□□ -0.17
SPTLC2-203ENST00000554901 OCM2P0CE71 109 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 NAT2P11245 290 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 ZNF20P17024 532 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 CA6P23280 308 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 OR8G1Q15617 311 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 TSTQ16762 297 aaKnown RBP14□□□□□ -0.17
SPTLC2-203ENST00000554901 UTS2BQ765I0 119 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 SERPINA12Q8IW75 414 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 CELF2-AS1Q8N7Q2 184 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 NEU4Q8WWR8 484 aaPredicted RBP14□□□□□ -0.17
SPTLC2-203ENST00000554901 FGGYQ96C11 551 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 TRMT61AQ96FX7 289 aaKnown RBP14□□□□□ -0.17
SPTLC2-203ENST00000554901 ADAT1Q9BUB4 502 aaKnown RBP14□□□□□ -0.17
SPTLC2-203ENST00000554901 CHST5Q9GZS9 411 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 ZNF701Q9NV72 531 aaPredicted RBP14□□□□□ -0.17
SPTLC2-203ENST00000554901 IL19Q9UHD0 177 aa14□□□□□ -0.17
SPTLC2-203ENST00000554901 NAV2Q8IVL1 2488 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 ALX3O95076 343 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 NRASP01111 189 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 IGHV1-46P01743 117 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 HLA-DPB1P04440 258 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 GALP22466 123 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 DNASE1P24855 282 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 GP2P55259 537 aaKnown RBP13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 PRDX4Q13162 271 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 SSX1Q16384 188 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 ZDHHC23Q8IYP9 409 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 OR2Z1Q8NG97 314 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 OR5D14Q8NGL3 314 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 UBASH3BQ8TF42 649 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 PIGCQ92535 297 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 PHYHIPQ92561 330 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 TMEM106AQ96A25 262 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 MBD6Q96DN6 1003 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 ADAT3Q96EY9 351 aaPredicted RBP13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 ELMOD3Q96FG2 381 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 HIST1H2AAQ96QV6 131 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 VRK1Q99986 396 aaPredicted RBP13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 EGLN1Q9GZT9 426 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 BEX4Q9NWD9 120 aaPredicted RBP13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 C14orf119Q9NWQ9 140 aa13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 SF3B6Q9Y3B4 125 aaKnown RBP13.99□□□□□ -0.17
SPTLC2-203ENST00000554901 ANKRD61A6NGH8 418 aa13.98□□□□□ -0.17
SPTLC2-203ENST00000554901 ZNF879B4DU55 563 aa13.98□□□□□ -0.17
SPTLC2-203ENST00000554901 MLNRO43193 412 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms